RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ADAM23O75077 832 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 SLFN14P0C7P3 912 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 ZDHHC11BP0C7U3 371 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 IRF1P10914 325 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 NTSR1P30989 418 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 ATP5C1P36542 298 aaKnown RBP12.72□□□□□ -0.37
CNOT4-211ENST00000498534 MAP3K7CLP57077 242 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 ZNF252P-AS1Q0IIN9 211 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 MAP7D1Q3KQU3 841 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 C10orf76Q5T2E6 689 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 LYSMD4Q5XG99 296 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 SLC36A4Q6YBV0 504 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 HTR3DQ70Z44 454 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 ARMCX6Q7L4S7 300 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 SLC9A9Q8IVB4 645 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 ETFBKMTQ8IXQ9 262 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 PLEKHO2Q8TD55 490 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 SLC2A14Q8TDB8 520 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 TMEM174Q8WUU8 243 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 XPO6Q96QU8 1125 aaKnown RBP12.72□□□□□ -0.37
CNOT4-211ENST00000498534 SMOQ99835 787 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 BACH2Q9BYV9 841 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 SLC32A1Q9H598 525 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 ZDHHC4Q9NPG8 344 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 DMAC2Q9NW81 257 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 SERTAD1Q9UHV2 236 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
CNOT4-211ENST00000498534 FRMD4BQ9Y2L6 1034 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 STARD13Q9Y3M8 1113 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 CHD6Q8TD26 2715 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 PDXKO00764 312 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 AP5Z1O43299 807 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 VNN1O95497 513 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 PROS1P07225 676 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 FAM200BP0CF97 657 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 CCDC130P13994 396 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 HOXD12P35452 270 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 PTGER3P43115 390 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 MAPK8P45983 427 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 NDST1P52848 882 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 ATXN3P54252 364 aaPredicted RBP12.71□□□□□ -0.37
CNOT4-211ENST00000498534 FOXC1Q12948 553 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 STK4Q13043 487 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 ZACNQ401N2 412 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 GRAMD4Q6IC98 578 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 SLC23A3Q6PIS1 610 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 SV2AQ7L0J3 742 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 PHTF2Q8N3S3 785 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 FRMD1Q8N878 549 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 TERB1Q8NA31 727 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 CEP76Q8TAP6 659 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 PAGE5Q96GU1 130 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 BBS2Q9BXC9 721 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 SDCBP2Q9H190 292 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 CSNK1G1Q9HCP0 422 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.378e-8■■■■■ 44.9
CNOT4-211ENST00000498534 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
CNOT4-211ENST00000498534 DNAJC17Q9NVM6 304 aaKnown RBP12.71□□□□□ -0.37
CNOT4-211ENST00000498534 MBD1Q9UIS9 605 aaPredicted RBP12.71□□□□□ -0.37
CNOT4-211ENST00000498534 CALUO43852 315 aaPredicted RBP12.7□□□□□ -0.38
CNOT4-211ENST00000498534 ZNF217O75362 1048 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 BEST1O76090 585 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 KIF20AO95235 890 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 TBX18O95935 607 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 F13A1P00488 732 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 NR3C1P04150 777 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 CFIP05156 583 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 HOXB2P14652 356 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 ENGP17813 658 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 PLA2G4AP47712 749 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 DLG4P78352 724 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 RPL6Q02878 288 aaKnown RBP12.7□□□□□ -0.38
CNOT4-211ENST00000498534 GFPT1Q06210 699 aaPredicted RBP12.7□□□□□ -0.38
CNOT4-211ENST00000498534 ORC1Q13415 861 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 DUOXA1Q1HG43 343 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 KMT5BQ4FZB7 885 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 CEP135Q66GS9 1140 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 RABEPKQ7Z6M1 372 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 GRAMD1CQ8IYS0 662 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 CHPFQ8IZ52 775 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 C12orf29Q8N999 325 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 ZMIZ2Q8NF64 920 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 SNX21Q969T3 373 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 CCDC47Q96A33 483 aaKnown RBP12.7□□□□□ -0.38
CNOT4-211ENST00000498534 ELMO3Q96BJ8 720 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 KLF16Q9BXK1 252 aaPredicted RBP12.7□□□□□ -0.38
CNOT4-211ENST00000498534 IMPG2Q9BZV3 1241 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 FAM49BQ9NUQ9 324 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 TMEM74BQ9NUR3 256 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 PILRBQ9UKJ0 227 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 SLC6A14Q9UN76 642 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 SCML2Q9UQR0 700 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 MYH10P35580 1976 aa12.7□□□□□ -0.38
CNOT4-211ENST00000498534 NEDD8-MDP1E9PL57 170 aa12.69□□□□□ -0.38
CNOT4-211ENST00000498534 KLRC4O43908 158 aa12.69□□□□□ -0.38
CNOT4-211ENST00000498534 ASS1P00966 412 aaKnown RBP12.69□□□□□ -0.38
CNOT4-211ENST00000498534 MYL1P05976 194 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms