RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PSEN1P49768 467 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 GPC5P78333 572 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 KRT83P78385 493 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 ZNF268Q14587 947 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-227ENST00000498056 TAF5Q15542 800 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 TEAD2Q15562 447 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 EFHC1Q5JVL4 640 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 PRSS36Q5K4E3 855 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 ATAT1Q5SQI0 421 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 C10orf76Q5T2E6 689 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 BSPRYQ5W0U4 402 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 PM20D1Q6GTS8 502 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 DCUN1D2Q6PH85 259 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 SCD5Q86SK9 330 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 TMEM150AQ86TG1 271 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 MON1AQ86VX9 555 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 EMC1Q8N766 993 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 JOSD2Q8TAC2 188 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 RNF139Q8WU17 664 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 HLA-CQ95604 372 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 MCRS1Q96EZ8 462 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 NUP85Q9BW27 656 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 S1PR5Q9H228 398 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 CCSER2Q9H7U1 834 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 POPDC2Q9HBU9 364 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 AVENQ9NQS1 362 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-227ENST00000498056 PARVAQ9NVD7 372 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 OSER1Q9NX31 292 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 CTTNBP2NLQ9P2B4 639 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 RASAL2Q9UJF2 1139 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 NUDT5Q9UKK9 219 aa14.21□□□□□ -0.13
CPNE1-227ENST00000498056 USP15Q9Y4E8 981 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-227ENST00000498056 C5orf42Q9H799 3197 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 TCF20Q9UGU0 1960 aaKnown RBP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 MIA3Q5JRA6 1907 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 C2orf78A6NCI8 922 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 ZNF840PA6NDX5 716 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 MDM4O15151 490 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 PAPLNO95428 1278 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 F11P03951 625 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 CCDC175P0C221 793 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 KRT3P12035 628 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 NCAM1P13591 858 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 RARGP13631 454 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 FLT3P36888 993 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 PPP3CCP48454 512 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 VAV2P52735 878 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 YWHAZP63104 245 aaKnown RBP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 SMAD4Q13485 552 aaKnown RBP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 CBX2Q14781 532 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 C10orf120Q5SQS8 335 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 HECTD3Q5T447 861 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 GPR158Q5T848 1215 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 PLEKHA7Q6IQ23 1121 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 TXLNBQ8N3L3 684 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 ITFG1Q8TB96 612 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 ZNF564Q8TBZ8 553 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 RFFLQ8WZ73 363 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 TRIM44Q96DX7 344 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 POMKQ9H5K3 350 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 FAM204AQ9H8W3 233 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 MRPL47Q9HD33 250 aaKnown RBP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 WDR6Q9NNW5 1121 aaKnown RBP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 ABCC13Q9NSE7 274 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 ASNSD1Q9NWL6 643 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 INTUQ9ULD6 942 aa14.2□□□□□ -0.14
CPNE1-227ENST00000498056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
CPNE1-227ENST00000498056 TICRRQ7Z2Z1 1910 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 SYNJ2BP-COX16A0A087WUM0 186 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 TCRBV5S1A1TA0A578 114 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 MOSPD3O75425 235 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 OAS1P00973 400 aaKnown RBP14.19□□□□□ -0.14
CPNE1-227ENST00000498056 CYP1A2P05177 515 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 CKMP06732 381 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 GLI1P08151 1106 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 ZDHHC11BP0C7U3 371 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 MBL2P11226 248 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-227ENST00000498056 SP100P23497 879 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-227ENST00000498056 SULT1E1P49888 294 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 TUBP50607 506 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 CDO1Q16878 200 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 DCAF6Q58WW2 860 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 TXNDC8Q6A555 127 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 TADA2BQ86TJ2 420 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 DEFB106AQ8N104 65 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 MAB21L3Q8N8X9 362 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 TTC16Q8NEE8 873 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 NECTIN4Q96NY8 510 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 SLC2A13Q96QE2 648 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 OLA1Q9NTK5 396 aaKnown RBP14.19□□□□□ -0.14
CPNE1-227ENST00000498056 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.19□□□□□ -0.14
CPNE1-227ENST00000498056 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.19□□□□□ -0.14
CPNE1-227ENST00000498056 CLIC5Q9NZA1 410 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 COX16Q9P0S2 106 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 ANAPC7Q9UJX3 599 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 STAP1Q9ULZ2 295 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 NAALADL1Q9UQQ1 740 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 ADGRG1Q9Y653 693 aa14.19□□□□□ -0.14
CPNE1-227ENST00000498056 PRUNE2Q8WUY3 3088 aa14.18□□□□□ -0.14
CPNE1-227ENST00000498056 TRAV19A0A0A6YYK7 116 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms