RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ALLCQ8N6M5 410 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 TXNDC5Q8NBS9 432 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 TAS1R2Q8TE23 839 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 CYFIP2Q96F07 1278 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 CHAMP1Q96JM3 812 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 HNRNPABQ99729 332 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 DUSP9Q99956 384 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 TPSD1Q9BZJ3 242 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 NIF3L1Q9GZT8 377 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 TMEM8AQ9HCN3 771 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 POLMQ9NP87 494 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 SPHK2Q9NRA0 654 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 DEC1Q9P2X7 70 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 LSM7Q9UK45 103 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 SCML2Q9UQR0 700 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 PCDHA5Q9Y5H7 936 aa12.42□□□□□ -0.42
NUDCD3-211ENST00000497978 MYOFQ9NZM1 2061 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 TBC1D3BA6NDS4 549 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 HOXC11O43248 304 aaPredicted RBP12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 STX10O60499 249 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 CAVIN2O95810 425 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 CD58P19256 250 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 ACO1P21399 889 aaKnown RBP12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 FOXK1P85037 733 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 PPP3CAQ08209 521 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 CAMK2BQ13554 666 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 EDRF1Q3B7T1 1238 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 KRT39Q6A163 491 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 CLEC20AQ6ZU45 233 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 TRMT11Q7Z4G4 463 aaKnown RBP12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 TADA2BQ86TJ2 420 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 C12orf40Q86WS4 652 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 BBS7Q8IWZ6 715 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 TTC39CQ8N584 583 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 NAT16Q8N8M0 369 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 IL17RCQ8NAC3 791 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 JAKMIP2Q96AA8 810 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 SPACA7Q96KW9 195 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 GOLPH3LQ9H4A5 285 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 PNPLA8Q9NP80 782 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 BCCIPQ9P287 314 aaKnown RBP eCLIP12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 INVSQ9Y283 1065 aa12.41□□□□□ -0.42
NUDCD3-211ENST00000497978 BCLAF3A2AJT9 711 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 GOLGA6L4A6NEF3 574 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 CETN3O15182 167 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 CYP26A1O43174 497 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 CILPO75339 1184 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 ADRB1P08588 477 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 EPB41P11171 864 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 KIR2DL1P43626 348 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 STPG1Q5TH74 334 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 HTR3DQ70Z44 454 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 TMEM25Q86YD3 366 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 SFTPA1Q8IWL2 248 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 MDGA1Q8NFP4 955 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 WHAMMQ8TF30 809 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 FAXDC2Q96IV6 333 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 XPO6Q96QU8 1125 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 TWNKQ96RR1 684 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 KLF16Q9BXK1 252 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 SMOC1Q9H4F8 434 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 APOBEC3GQ9HC16 384 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 CYLDQ9NQC7 956 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 RMND1Q9NWS8 449 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 DNMT3LQ9UJW3 386 aa12.4□□□□□ -0.42
NUDCD3-211ENST00000497978 A0A1W2PQH9 124 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 ANTXRLA6NF34 631 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 HHLA1C9JL84 531 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 SGK1O00141 431 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 ZBTB24O43167 697 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 TULP3O75386 442 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 TBX18O95935 607 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 RALAP11233 206 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 RARGP13631 454 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 PLA2G4AP47712 749 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 PGFP49763 221 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 MXI1P50539 228 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 MESP2Q0VG99 397 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 ZCWPW2Q504Y3 356 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 C10orf120Q5SQS8 335 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 C10orf76Q5T2E6 689 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 EMC10Q5UCC4 262 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 PMS2CLQ68D20 193 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 RNF43Q68DV7 783 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 GRAMD4Q6IC98 578 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 KLHDC10Q6PID8 442 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 GPRIN1Q7Z2K8 1008 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 CYP2U1Q7Z449 544 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 ETFBKMTQ8IXQ9 262 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 PHTF2Q8N3S3 785 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 TERB1Q8NA31 727 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 FBXL13Q8NEE6 735 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 HMGB4Q8WW32 186 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 CDK5RAP1Q96SZ6 601 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms