RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 XPNPEP3Q9NQH7 507 aa3.87□□□□□ -1.79
PSPC1-205ENST00000497722 TMOD4Q9NZQ9 345 aa3.87□□□□□ -1.79
PSPC1-205ENST00000497722 PCDHGB2Q9Y5G2 931 aa3.87□□□□□ -1.79
PSPC1-205ENST00000497722 SMIM22K7EJ46 135 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 TOP3BO95985 862 aaKnown RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 DLDP09622 509 aaKnown RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 TSHRP16473 764 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 ABCB4P21439 1286 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 TECP42680 631 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 SUMO2P61956 95 aaKnown RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 KCNAB1Q14722 419 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 DAZAP2Q15038 168 aaPredicted RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 ETFDHQ16134 617 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 P3H1Q32P28 736 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 PTCHD3Q3KNS1 767 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 FAXCQ5TGI0 409 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 DENND2CQ68D51 928 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 PLAG1Q6DJT9 500 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 MTHFD1LQ6UB35 978 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 NAPRTQ6XQN6 538 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 TRIM72Q6ZMU5 477 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 CAND1Q86VP6 1230 aaKnown RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 TTC30AQ86WT1 665 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 SKAP1Q86WV1 359 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 RAB11FIP4Q86YS3 637 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 ABRAQ8N0Z2 381 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 GALNT16Q8N428 558 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 SAMD3Q8N6K7 520 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 CYP2W1Q8TAV3 490 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 DEPTORQ8TB45 409 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 RPL36ALQ969Q0 106 aaKnown RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 MUL1Q969V5 352 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 LTV1Q96GA3 475 aaPredicted RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 ZBTB45Q96K62 511 aaPredicted RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 HIST1H2AAQ96QV6 131 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 RPS6KC1Q96S38 1066 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 PSMD1Q99460 953 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 C17orf80Q9BSJ5 609 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 ZNF700Q9H0M5 742 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 SLC25A32Q9H2D1 315 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 DHX36Q9H2U1 1008 aaKnown RBP3.86□□□□□ -1.79
PSPC1-205ENST00000497722 GJB4Q9NTQ9 266 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 HPSEQ9Y251 543 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 MAN2B2Q9Y2E5 1009 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 COMMD10Q9Y6G5 202 aa3.86□□□□□ -1.79
PSPC1-205ENST00000497722 FER1L4A9Z1Z3 1794 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 CYP2D7A0A087X1C5 515 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 SMIM35A0A1B0GVV1 85 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 TCRBV5S1A1TA0A578 114 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 F5H423 210 aaPredicted RBP3.85□□□□□ -1.79
PSPC1-205ENST00000497722 PODXLO00592 558 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 CES2O00748 559 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 KCNAB3O43448 404 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 PRKCBP05771 671 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 NPSP0C0P6 89 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 SETSIPP0DME0 302 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 CYP2D6P10635 497 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 HGFP14210 728 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 IL1R1P14778 569 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 CD19P15391 556 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 EEF1GP26641 437 aaKnown RBP3.85□□□□□ -1.79
PSPC1-205ENST00000497722 ATICP31939 592 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 GATMP50440 423 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 ALDH5A1P51649 535 aaPredicted RBP3.85□□□□□ -1.79
PSPC1-205ENST00000497722 GPS1Q13098 491 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 LY6KQ17RY6 165 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 ZNF750Q32MQ0 723 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 TBC1D25Q3MII6 688 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 SLC9A4Q6AI14 798 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 FCRL6Q6DN72 434 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 XRRA1Q6P2D8 792 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 GGT6Q6P531 493 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 CRTC1Q6UUV9 634 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 KIRREL2Q6UWL6 708 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 CLEC9AQ6UXN8 241 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 P3H2Q8IVL5 708 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 SIRT6Q8N6T7 355 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 ZNF366Q8N895 744 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 BRI3BPQ8WY22 251 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 KIAA1191Q96A73 305 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 RSPRY1Q96DX4 576 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 VPS50Q96JG6 964 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 SNX27Q96L92 541 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 ASB2Q96Q27 587 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 SNX18Q96RF0 628 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 EIF3CQ99613 913 aaKnown RBP3.85□□□□□ -1.79
PSPC1-205ENST00000497722 SELENOOQ9BVL4 669 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 COLEC11Q9BWP8 271 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 PRSS22Q9GZN4 317 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 CHST12Q9NRB3 414 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 TFCP2L1Q9NZI6 479 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 DNMT3BQ9UBC3 853 aaKnown RBP3.85□□□□□ -1.79
PSPC1-205ENST00000497722 MYO1AQ9UBC5 1043 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 DNAJB11Q9UBS4 358 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 DRG1Q9Y295 367 aaKnown RBP3.85□□□□□ -1.79
PSPC1-205ENST00000497722 SNX14Q9Y5W7 946 aa3.85□□□□□ -1.79
PSPC1-205ENST00000497722 AP4M1O00189 453 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 AREL1O15033 823 aa3.84□□□□□ -1.79
PSPC1-205ENST00000497722 CD3EAPO15446 510 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms