RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 GBP6Q6ZN66 633 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 ADGRG2Q8IZP9 1017 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 ZNF276Q8N554 614 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 RBBP8NLQ8NC74 664 aaPredicted RBP16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 UBA3Q8TBC4 463 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 SLC35F5Q8WV83 523 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 IQCDQ96DY2 449 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 NAP1L5Q96NT1 182 aaPredicted RBP16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 CHRDQ9H2X0 955 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 FBRSL1Q9HCM7 1045 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 FAM86C1Q9NVL1 165 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 CFAP97Q9P2B7 532 aa16.8■□□□□ 0.28
CTDSP1-214ENST00000497677 ANAPC1Q9H1A4 1944 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 LGALS16A8MUM7 142 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 TRDMT1O14717 391 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 GREM1O60565 184 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 BRD2P25440 801 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 GJA4P35212 333 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 PLA2G4AP47712 749 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 BST2Q10589 180 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 MTAPQ13126 283 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 CCINQ13939 588 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 TRIM14Q14142 442 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 EXOC3L4Q17RC7 722 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 GAB4Q2WGN9 574 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 VWA3BQ502W6 1294 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 HSP90AA4PQ58FG1 418 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 TMEM196Q5HYL7 178 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 KLHDC10Q6PID8 442 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 BHLHA9Q7RTU4 235 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 TMC6Q7Z403 805 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 ZSCAN30Q86W11 494 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 DDX42Q86XP3 938 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 ATOH1Q92858 354 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 ATP2A3Q93084 1043 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 TUBGCP2Q9BSJ2 902 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 KLF16Q9BXK1 252 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 NDST4Q9H3R1 872 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 SIX2Q9NPC8 291 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 CLIC5Q9NZA1 410 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.79■□□□□ 0.285e-7■■■□□ 16
CTDSP1-214ENST00000497677 OBSL1O75147 1896 aa16.79■□□□□ 0.28
CTDSP1-214ENST00000497677 A0A1W2PQC6 194 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 E2F8A0AVK6 867 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 SCAMP3O14828 347 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 TPM1P09493 284 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 SETSIPP0DME0 302 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 RARGP13631 454 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 ATP5C1P36542 298 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 GALK1P51570 392 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 TKTL1P51854 596 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 FSTL4Q6MZW2 842 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 ENOSF1Q7L5Y1 443 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 CPA6Q8N4T0 437 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 NDRG1Q92597 394 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 SPATA6Q9NWH7 488 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 HESX1Q9UBX0 185 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 NUDT5Q9UKK9 219 aa16.78■□□□□ 0.28
CTDSP1-214ENST00000497677 ZBED1O96006 694 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 SP9P0CG40 484 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 NBL1P41271 181 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 PSEN1P49768 467 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 MFAP3P55082 362 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 SLC8A3P57103 927 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 KCNMA1Q12791 1236 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 FKBP15Q5T1M5 1219 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 PMF1Q6P1K2 205 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 RHBDF2Q6PJF5 856 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 ULBP1Q9BZM6 244 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 ACP6Q9NPH0 428 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 NAGPAQ9UK23 515 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 AJAP1Q9UKB5 411 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 ZKSCAN5Q9Y2L8 839 aa16.77■□□□□ 0.28
CTDSP1-214ENST00000497677 CACNA1IQ9P0X4 2223 aa16.77■□□□□ 0.27
CTDSP1-214ENST00000497677 TICRRQ7Z2Z1 1910 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 KIF26AQ9ULI4 1882 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 PROB1E7EW31 1015 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 SLC9A3R1O14745 358 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 MDM4O15151 490 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 NFATC1O95644 943 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 CYP17A1P05093 508 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 KRT5P13647 590 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 PBX1P40424 430 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 RPL34P49207 117 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 AMPD2Q01433 879 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 DHCR24Q15392 516 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 STILQ15468 1287 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 DGKKQ5KSL6 1271 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 Q6ZS52 159 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 SCML4Q8N228 414 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 CCDC112Q8NEF3 446 aa16.76■□□□□ 0.27
CTDSP1-214ENST00000497677 SHC3Q92529 594 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms