RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 ATP5C1P36542 298 aaKnown RBP17■□□□□ 0.31
FAM3A-220ENST00000497506 PRKCIP41743 596 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 ZBED6P86452 979 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 USP4Q13107 963 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 ASIC2Q16515 512 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 SH3RF2Q8TEC5 729 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 EDAQ92838 391 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 AGPAT1Q99943 283 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 TRMT61BQ9BVS5 477 aaKnown RBP17■□□□□ 0.31
FAM3A-220ENST00000497506 TRIM5Q9C035 493 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 SLC2A4RGQ9NR83 387 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 SMPD4Q9NXE4 827 aa17■□□□□ 0.31
FAM3A-220ENST00000497506 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17■□□□□ 0.31
FAM3A-220ENST00000497506 COL4A2P08572 1712 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 LEFTY2O00292 366 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 MDM4O15151 490 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 LTFP02788 710 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 ERBB2P04626 1255 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 FYNP06241 537 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 UNGP13051 313 aaPredicted RBP16.99■□□□□ 0.31
FAM3A-220ENST00000497506 GDI1P31150 447 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 CASP14P31944 242 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 GABRB2P47870 512 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 C10orf120Q5SQS8 335 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 NAA35Q5VZE5 725 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 BTBD8Q5XKL5 378 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 TRIM72Q6ZMU5 477 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 ZNF397Q8NF99 534 aaPredicted RBP16.99■□□□□ 0.31
FAM3A-220ENST00000497506 CPA5Q8WXQ8 436 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 EDEM1Q92611 657 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 SYN2Q92777 582 aaPredicted RBP16.99■□□□□ 0.31
FAM3A-220ENST00000497506 PIWIL1Q96J94 861 aaKnown RBP16.99■□□□□ 0.31
FAM3A-220ENST00000497506 CDK5RAP1Q96SZ6 601 aaKnown RBP16.99■□□□□ 0.31
FAM3A-220ENST00000497506 KLF16Q9BXK1 252 aaPredicted RBP16.99■□□□□ 0.31
FAM3A-220ENST00000497506 NUCKS1Q9H1E3 243 aaKnown RBP16.99■□□□□ 0.31
FAM3A-220ENST00000497506 EPHX3Q9H6B9 360 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 GKN1Q9NS71 199 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 ABCC13Q9NSE7 274 aa16.99■□□□□ 0.31
FAM3A-220ENST00000497506 LUC7L2Q9Y383 392 aaKnown RBP16.99■□□□□ 0.31
FAM3A-220ENST00000497506 TICRRQ7Z2Z1 1910 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 FAM170AA1A519 330 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 ARNTLO00327 626 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 DLL1O00548 723 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 CHADO15335 359 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 SART1O43290 800 aaKnown RBP16.98■□□□□ 0.31
FAM3A-220ENST00000497506 MTF1Q14872 753 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 CLEC16AQ2KHT3 1053 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 ARHGAP29Q52LW3 1261 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 FAM183BPQ6ZVS7 135 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 TADA2BQ86TJ2 420 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 ERICH1Q86X53 443 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 YAF2Q8IY57 180 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 IPO4Q8TEX9 1081 aaKnown RBP16.98■□□□□ 0.31
FAM3A-220ENST00000497506 WBP2Q969T9 261 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 ASIC4Q96FT7 647 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 ZFYVE19Q96K21 471 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 NACA2Q9H009 215 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 HAUS4Q9H6D7 363 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 BRD9Q9H8M2 597 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 DNMT3LQ9UJW3 386 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 TECTAO75443 2155 aa16.98■□□□□ 0.31
FAM3A-220ENST00000497506 ZNF263O14978 683 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 SKILP12757 684 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 ZNF75DP51815 510 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 SNX16P57768 344 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 SIGLEC14Q08ET2 396 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 EFEMP1Q12805 493 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 TRIM14Q14142 442 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 TAF5Q15542 800 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 C2CD6Q53TS8 623 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 IER5LQ5T953 404 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 HGSNATQ68CP4 663 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 OR6B2Q6IFH4 312 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 OLFML1Q6UWY5 402 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 RSRC2Q7L4I2 434 aaKnown RBP16.97■□□□□ 0.31
FAM3A-220ENST00000497506 ZNF571Q7Z3V5 609 aaPredicted RBP16.97■□□□□ 0.31
FAM3A-220ENST00000497506 TTC16Q8NEE8 873 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 C18orf8Q96DM3 657 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 FAM83CQ9BQN1 747 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 SYNCQ9H7C4 482 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 TRPV5Q9NQA5 729 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 OLA1Q9NTK5 396 aaKnown RBP16.97■□□□□ 0.31
FAM3A-220ENST00000497506 THG1LQ9NWX6 298 aaKnown RBP16.97■□□□□ 0.31
FAM3A-220ENST00000497506 CFAP97Q9P2B7 532 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 RASAL2Q9UJF2 1139 aa16.97■□□□□ 0.31
FAM3A-220ENST00000497506 GREM1O60565 184 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 TNFAIP3P21580 790 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 MMP8P22894 467 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 YWHAZP63104 245 aaKnown RBP16.96■□□□□ 0.31
FAM3A-220ENST00000497506 SLC6A3Q01959 620 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 CENPCQ03188 943 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 KLHL30Q0D2K2 578 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 TBX2Q13207 712 aaPredicted RBP16.96■□□□□ 0.31
FAM3A-220ENST00000497506 MSANTD2Q6P1R3 559 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 TRIM67Q6ZTA4 783 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 BEND5Q7L4P6 421 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 DDX42Q86XP3 938 aaKnown RBP eCLIP16.96■□□□□ 0.31
FAM3A-220ENST00000497506 XYLT1Q86Y38 959 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 MIB1Q86YT6 1006 aa16.96■□□□□ 0.31
FAM3A-220ENST00000497506 KIAA1958Q8N8K9 716 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms