RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CTBP1Q13363 440 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 KIR3DS1Q14943 382 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 NPY5RQ15761 445 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 SMAD1Q15797 465 aaKnown RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 SLC14A2Q15849 920 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CDC37Q16543 378 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 SKIDA1Q1XH10 827 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM26FQ5R3K3 315 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 AGAP9Q5VTM2 703 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM205BPQ63HN1 556 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 TBC1D9BQ66K14 1250 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 BICRALQ6AI39 1079 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 FCRL6Q6DN72 434 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 VASNQ6EMK4 673 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ETV3LQ6ZN32 361 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 UNC13DQ70J99 1090 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 RNF44Q7L0R7 432 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 GATAD2AQ86YP4 633 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 KIAA2013Q8IYS2 634 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 PQLC1Q8N2U9 271 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CELF5Q8N6W0 485 aaKnown RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 OR1N1Q8NGS0 311 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 OR56A3Q8NH54 315 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 SLC22A17Q8WUG5 538 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 BCL7CQ8WUZ0 217 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 RAPGEF4Q8WZA2 1011 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 GFM2Q969S9 779 aaKnown RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZDHHC12Q96GR4 267 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 TMX3Q96JJ7 454 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM227BQ96M60 508 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 WDR92Q96MX6 357 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ALDH8A1Q9H2A2 487 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CCDC68Q9H2F9 335 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 RETREG1Q9H6L5 497 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CARS2Q9HA77 564 aaKnown RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 MSL2Q9HCI7 577 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 OLA1Q9NTK5 396 aaKnown RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 JKAMPQ9P055 326 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 LRFN1Q9P244 771 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 CFAP97Q9P2B7 532 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 SAE1Q9UBE0 346 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 Q9UFV3 132 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZNF112Q9UJU3 913 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 PCDHA6Q9UN73 950 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 GPR34Q9UPC5 381 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 SCAF8Q9UPN6 1271 aaKnown RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 MTO1Q9Y2Z2 717 aaKnown RBP2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 PLEKHM1Q9Y4G2 1056 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 PCDHA1Q9Y5I3 950 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 NBEAL1Q6ZS30 2694 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ASXL3Q9C0F0 2248 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 LRRK2Q5S007 2527 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZSWIM8A7E2V4 1837 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 ABCA2Q9BZC7 2435 aa2.77□□□□□ -1.97
CKS1BP2-201ENST00000497342 RIC1Q4ADV7 1423 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 PCNX1Q96RV3 2341 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 GXYLT2A0PJZ3 443 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM170AA1A519 330 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 BICDL2A1A5D9 508 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 PI4KAP2A4QPH2 592 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM90A18PA6NE21 464 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM90A16PA6NEW6 464 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SAC3D1A6NKF1 404 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM90A9PA6NNJ1 464 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM90A5PA8MXJ8 464 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ABLIM1O14639 778 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 PJA2O43164 708 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 TBC1D4O60343 1298 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 PSPNO60542 156 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 TLR2O60603 784 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZBED4O75132 1171 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 GFPT2O94808 682 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 NDST3O95803 873 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 AHSGP02765 367 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM90A15PP0C7V4 464 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FAM90A14PP0C7W9 464 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 NR2F1P10589 423 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 RARBP10826 455 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 IDEP14735 1019 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 GYPEP15421 78 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 HDCP19113 662 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FSTP19883 344 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 FDXRP22570 491 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CHMP24386 653 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 MST1P26927 711 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ALDH1B1P30837 517 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 HOXD13P35453 343 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ETV4P43268 484 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 AFMP43652 599 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CHRNA4P43681 627 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 PSMC4P43686 418 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CCR10P46092 362 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SLC11A2P49281 568 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 AP2B1P63010 937 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 NKX3-2P78367 333 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 CD83Q01151 205 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 SRSF1Q07955 248 aaKnown RBP eCLIP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 TMEM62Q0P6H9 643 aa2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 TOP3AQ13472 1001 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP2-201ENST00000497342 ACVR2BQ13705 512 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms