RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 NOP2P46087 812 aaKnown RBP3.36□□□□□ -1.87
SHTN1-206ENST00000497044 GPC3P51654 580 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 PKP1Q13835 747 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 TFDP1Q14186 410 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 USP41Q3LFD5 358 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 RILPL1Q5EBL4 403 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 SLC8B1Q6J4K2 584 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 APTXQ7Z2E3 356 aaKnown RBP3.36□□□□□ -1.87
SHTN1-206ENST00000497044 BRAPQ7Z569 592 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 PROSER1Q86XN7 944 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 CPLX3Q8WVH0 158 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 PHKBQ93100 1093 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 C8orf76Q96K31 380 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 MEGF10Q96KG7 1140 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 C16orf92Q96LL3 132 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 RTEL1Q9NZ71 1219 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 VPS54Q9P1Q0 977 aa3.36□□□□□ -1.87
SHTN1-206ENST00000497044 NOC2LQ9Y3T9 749 aaKnown RBP3.36□□□□□ -1.87
SHTN1-206ENST00000497044 NCANO14594 1321 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 MSH4O15457 936 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 STBD1O95210 358 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 BPNT1O95861 308 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ZNF286BP0CG31 522 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 VAV1P15498 845 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 RPL9P32969 192 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 NUDT1P36639 197 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ANP32AP39687 249 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 QARSP47897 775 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ALDH7A1P49419 539 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 RNF4P78317 190 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 CCT2P78371 535 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 TNK2Q07912 1038 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PDIA5Q14554 519 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PDGFRLQ15198 375 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 SKOR2Q2VWA4 1001 aaPredicted RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PRR16Q569H4 304 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 STPG1Q5TH74 334 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ARL6IP4Q66PJ3 421 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ISM2Q6H9L7 571 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 IL27RAQ6UWB1 636 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 GLB1LQ6UWU2 654 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 SYT13Q7L8C5 426 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ZNF276Q8N554 614 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PCDH19Q8TAB3 1148 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ETNPPLQ8TBG4 499 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 LENG9Q96B70 501 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 AK8Q96MA6 479 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 POLR3CQ9BUI4 534 aaPredicted RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 SMURF1Q9HCE7 757 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 MARCH5Q9NX47 278 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 KCND2Q9NZV8 630 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 RAI2Q9Y5P3 530 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 HTTP42858 3142 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 DENND3A2RUS2 1198 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 FAM86B1E9PN63 330 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 MGEA5O60502 916 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 NEMFO60524 1076 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PRAMEF1O95521 474 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 FAM86B2P0C5J1 330 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ARP10275 920 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 INSRRP14616 1297 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 U2AF2P26368 475 aaKnown RBP eCLIP3.35□□□□□ -1.878e-12■■■■■ 39.7
SHTN1-206ENST00000497044 CXCL12P48061 93 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PPP3CCP48454 512 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ARL4DP49703 201 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 MRPS21P82921 87 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 NCBP1Q09161 790 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ITGB3BPQ13352 177 aaPredicted RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 SNW1Q13573 536 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 MXD4Q14582 209 aaPredicted RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 STAT4Q14765 748 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 RTP5Q14D33 572 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 IQCB1Q15051 598 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PPP2R5AQ15172 486 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ME3Q16798 604 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 RARS2Q5T160 578 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PLPP4Q5VZY2 271 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 CDCA2Q69YH5 1023 aaPredicted RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 ATL3Q6DD88 541 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 TMPRSS7Q7RTY8 843 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 KANSL1Q7Z3B3 1105 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 KIAA2013Q8IYS2 634 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 COL27A1Q8IZC6 1860 aaPredicted RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 MCPH1Q8NEM0 835 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 FBXO18Q8NFZ0 1043 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 SPATA20Q8TB22 786 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 RPGRIP1Q96KN7 1286 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 TCEANC2Q96MN5 208 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 CDC6Q99741 560 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 PYM1Q9BRP8 204 aaKnown RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 VN1R3Q9BXE9 311 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 C2orf40Q9H1Z8 148 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 NRDE2Q9H7Z3 1164 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 TMEM206Q9H813 350 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 CERS4Q9HA82 394 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 C17orf75Q9HAS0 396 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 SETD4Q9NVD3 440 aa3.35□□□□□ -1.87
SHTN1-206ENST00000497044 SPATA6Q9NWH7 488 aaPredicted RBP3.35□□□□□ -1.87
SHTN1-206ENST00000497044 WDR27A2RRH5 827 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms