RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 FNIP1Q8TF40 1166 aa19.13■□□□□ 0.65
RGP1-202ENST00000496906 BTBD6Q96KE9 485 aa19.13■□□□□ 0.65
RGP1-202ENST00000496906 TRIM62Q9BVG3 475 aa19.13■□□□□ 0.65
RGP1-202ENST00000496906 F11P03951 625 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 MATKP42679 507 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 EPHA5P54756 1037 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 SNX30Q5VWJ9 437 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 Q7L0L9 218 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 TMEM150AQ86TG1 271 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 C12orf76Q8N812 135 aaPredicted RBP19.12■□□□□ 0.65
RGP1-202ENST00000496906 TPCN2Q8NHX9 752 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 RXFP2Q8WXD0 754 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 CALR3Q96L12 384 aaKnown RBP19.12■□□□□ 0.65
RGP1-202ENST00000496906 CORO1BQ9BR76 489 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 ASAH2Q9NR71 780 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 ABCC13Q9NSE7 274 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 HCFC1R1Q9NWW0 138 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 CLIC5Q9NZA1 410 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 DNMT3BQ9UBC3 853 aaKnown RBP19.12■□□□□ 0.65
RGP1-202ENST00000496906 NAALADL1Q9UQQ1 740 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 CAPN6Q9Y6Q1 641 aa19.12■□□□□ 0.65
RGP1-202ENST00000496906 ZNF840PA6NDX5 716 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 MYO1FO00160 1098 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 MOCS3O95396 460 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 NCAM1P13591 858 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 PDGFRAP16234 1089 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 PTPN2P17706 415 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 GPD1P21695 349 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 PPP3CCP48454 512 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 ZNF143P52747 638 aaPredicted RBP19.11■□□□□ 0.65
RGP1-202ENST00000496906 NAP1L1P55209 391 aaKnown RBP19.11■□□□□ 0.65
RGP1-202ENST00000496906 ZNF252P-AS1Q0IIN9 211 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 COL19A1Q14993 1142 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 IFI16Q16666 785 aaKnown RBP19.11■□□□□ 0.65
RGP1-202ENST00000496906 CTC1Q2NKJ3 1217 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 SYPL2Q5VXT5 272 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 BTBD8Q5XKL5 378 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 ANKRD54Q6NXT1 300 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 EDEM1Q92611 657 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 DDX23Q9BUQ8 820 aaKnown RBP19.11■□□□□ 0.65
RGP1-202ENST00000496906 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.11■□□□□ 0.65
RGP1-202ENST00000496906 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.11■□□□□ 0.65
RGP1-202ENST00000496906 TRPM5Q9NZQ8 1165 aa19.11■□□□□ 0.65
RGP1-202ENST00000496906 DPYSL4O14531 572 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 CAPN9O14815 690 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 GABRR2P28476 465 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 NOS2P35228 1153 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 CCDC14Q49A88 953 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 PABPC1LQ4VXU2 614 aaKnown RBP19.1■□□□□ 0.65
RGP1-202ENST00000496906 DCAF6Q58WW2 860 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 TMC5Q6UXY8 1006 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 GAREM2Q75VX8 874 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 CFAP57Q96MR6 1250 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 IRX2Q9BZI1 471 aaPredicted RBP19.1■□□□□ 0.65
RGP1-202ENST00000496906 IP6K2Q9UHH9 426 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 GRID2IPA4D2P6 1211 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 NCK2O43639 380 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 BUB1BO60566 1050 aaPredicted RBP19.1■□□□□ 0.65
RGP1-202ENST00000496906 RHOP08100 348 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 RARGP13631 454 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 PSMA2P25787 234 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 CDC25CP30307 473 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 SDC4P31431 198 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 PTPN9P43378 593 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 SYCE2Q6PIF2 218 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 MICALL1Q8N3F8 863 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 DEFB123Q8N688 67 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 LEMD2Q8NC56 503 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 MYLIPQ8WY64 445 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 SMG7Q92540 1137 aaKnown RBP19.1■□□□□ 0.65
RGP1-202ENST00000496906 NT5C3BQ969T7 300 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 CDX2Q99626 313 aaPredicted RBP19.1■□□□□ 0.65
RGP1-202ENST00000496906 CNPY3Q9BT09 278 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 CLEC1BQ9P126 229 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 LCMT1Q9UIC8 334 aa19.1■□□□□ 0.65
RGP1-202ENST00000496906 NRG2O14511 850 aaPredicted RBP19.09■□□□□ 0.65
RGP1-202ENST00000496906 TBX10O75333 385 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 PROSCO94903 275 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 FGF19O95750 216 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 RALAP11233 206 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 MYL4P12829 197 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 HOXB8P17481 243 aaPredicted RBP19.09■□□□□ 0.65
RGP1-202ENST00000496906 CCR2P41597 374 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 TUBP50607 506 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 PITX1P78337 314 aaPredicted RBP19.09■□□□□ 0.65
RGP1-202ENST00000496906 MESDQ14696 234 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 SLC25A52Q3SY17 297 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 RARS2Q5T160 578 aaKnown RBP19.09■□□□□ 0.65
RGP1-202ENST00000496906 OTUD1Q5VV17 481 aaPredicted RBP19.09■□□□□ 0.65
RGP1-202ENST00000496906 C11orf63Q6NUN7 778 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 PDZD4Q76G19 769 aaPredicted RBP19.09■□□□□ 0.65
RGP1-202ENST00000496906 GRASPQ7Z6J2 395 aaPredicted RBP19.09■□□□□ 0.65
RGP1-202ENST00000496906 ZNF276Q8N554 614 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 NIPA2Q8N8Q9 360 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 LRRC57Q8N9N7 239 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 GUCD1Q96NT3 240 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 NPY6RQ99463 290 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 ADAM33Q9BZ11 813 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 PIDD1Q9HB75 910 aa19.09■□□□□ 0.65
RGP1-202ENST00000496906 CLDND1Q9NY35 253 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms