RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 TRIM58Q8NG06 486 aa9.01□□□□□ -0.97
U2AF1-212ENST00000496462 KBTBD7Q8WVZ9 684 aa9.01□□□□□ -0.97
U2AF1-212ENST00000496462 TRMT2BQ96GJ1 504 aaKnown RBP9.01□□□□□ -0.97
U2AF1-212ENST00000496462 DNAJC7Q99615 494 aa9.01□□□□□ -0.97
U2AF1-212ENST00000496462 TRMT61BQ9BVS5 477 aaKnown RBP9.01□□□□□ -0.97
U2AF1-212ENST00000496462 NUP85Q9BW27 656 aa9.01□□□□□ -0.97
U2AF1-212ENST00000496462 ZWILCHQ9H900 591 aa9.01□□□□□ -0.97
U2AF1-212ENST00000496462 AVENQ9NQS1 362 aaPredicted RBP9.01□□□□□ -0.97
U2AF1-212ENST00000496462 DAB1O75553 588 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 KLK7P49862 253 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 PHF13Q86YI8 300 aaPredicted RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 C3orf20Q8ND61 904 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 PHF7Q9BWX1 381 aaPredicted RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 PCDHA13Q9Y5I0 950 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 MIF4GDA9UHW6 222 aaKnown RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 E5RJQ4 531 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 GYPCP04921 128 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 ZNF177Q13360 481 aaPredicted RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 BRMS1LQ5PSV4 323 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 SDHAF4Q5VUM1 108 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 RWDD4Q6NW29 188 aaKnown RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 CLEC20AQ6ZU45 233 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 TMEM173Q86WV6 379 aaPredicted RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 GAS2L3Q86XJ1 694 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 BPIFB1Q8TDL5 484 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 METTL5Q9NRN9 209 aaKnown RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 GMIPQ9P107 970 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 A0A1W2PRU2 124 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 H3BQ06 376 aaPredicted RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 LUC7L3O95232 432 aaKnown RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 ARHGAP25P42331 645 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 GEMIN4P57678 1058 aaKnown RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 TFF2Q03403 129 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 MAPK8IP2Q13387 824 aaPredicted RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 NOP9Q86U38 636 aaKnown RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 C12orf76Q8N812 135 aaPredicted RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 KCTD6Q8NC69 237 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 SLC30A5Q8TAD4 765 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 SLC22A17Q8WUG5 538 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 SMARCD2Q92925 531 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 RBM41Q96IZ5 413 aaKnown RBP9□□□□□ -0.97
U2AF1-212ENST00000496462 SMPD4Q9NXE4 827 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 PRKAG3Q9UGI9 489 aa9□□□□□ -0.97
U2AF1-212ENST00000496462 GOLGA6CA6NDK9 693 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 GOLGA6BA6NDN3 693 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 PIK3R2O00459 728 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 NOL4O94818 638 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 GOLGA6DP0CG33 693 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 AIF1P55008 147 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 ATP11AP98196 1134 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 CDH18Q13634 790 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 RPS6KA1Q15418 735 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 ANO4Q32M45 955 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 RNF10Q8N5U6 811 aaKnown RBP8.99□□□□□ -0.97
U2AF1-212ENST00000496462 DDI1Q8WTU0 396 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 TMA16Q96EY4 203 aaKnown RBP8.99□□□□□ -0.97
U2AF1-212ENST00000496462 SIK2Q9H0K1 926 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 TDP1Q9NUW8 608 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 GOLGA6AQ9NYA3 693 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 CLCN1P35523 988 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 HYAL1Q12794 435 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 HOMEZQ8IX15 550 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 MCOLN2Q8IZK6 566 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 DEFB106AQ8N104 65 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 NDUFAF2Q8N183 169 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 ATP2A3Q93084 1043 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 TBCBQ99426 244 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 SDCBP2Q9H190 292 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 PRDM16Q9HAZ2 1276 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 CNTN6Q9UQ52 1028 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 MAN2B1O00754 1011 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 TUBP50607 506 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 DAOAP59103 153 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 HS1BP3Q53T59 392 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 SLC26A9Q7LBE3 791 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 SCUBE3Q8IX30 993 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 RHOT1Q8IXI2 618 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 HJURPQ8NCD3 748 aaPredicted RBP8.99□□□□□ -0.97
U2AF1-212ENST00000496462 ING5Q8WYH8 240 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 MCEEQ96PE7 176 aa8.99□□□□□ -0.97
U2AF1-212ENST00000496462 IRX2Q9BZI1 471 aaPredicted RBP8.99□□□□□ -0.97
U2AF1-212ENST00000496462 A0A1W2PQH9 124 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 TRUB2O95900 331 aaKnown RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 GAS8O95995 478 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 POU3F3P20264 500 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 MATKP42679 507 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 GALCP54803 685 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 WNT7BP56706 349 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 TPI1P60174 286 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 NOMO3P69849 1222 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 CENPCQ03188 943 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 GAD2Q05329 585 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 MSANTD3Q96H12 275 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 RPRD1AQ96P16 312 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 LPIN3Q9BQK8 851 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 DUS2Q9NX74 493 aaKnown RBP8.98□□□□□ -0.97
U2AF1-212ENST00000496462 CFAP97Q9P2B7 532 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 SIGLEC16A6NMB1 481 aa8.98□□□□□ -0.97
U2AF1-212ENST00000496462 H0Y626 953 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms