RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.05■□□□□ -0
VTI1A-209ENST00000496445 EBF1Q9UH73 591 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 NUDT5Q9UKK9 219 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 MAN1B1Q9UKM7 699 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 MMP17Q9ULZ9 603 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 USP3Q9Y6I4 520 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 TNRC6BQ9UPQ9 1833 aaKnown RBP15.05■□□□□ -0
VTI1A-209ENST00000496445 NUP205Q92621 2012 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 MYO18AQ92614 2054 aaKnown RBP15.05■□□□□ -0
VTI1A-209ENST00000496445 A0A0A0MRY4 1105 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 DCLK1O15075 740 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 GADD45BO75293 160 aaPredicted RBP15.04■□□□□ -0
VTI1A-209ENST00000496445 RARGP13631 454 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 BMP6P22004 513 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 ATXN1P54253 815 aaKnown RBP15.04■□□□□ -0
VTI1A-209ENST00000496445 GAD2Q05329 585 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 CUL2Q13617 745 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 CSRP2Q16527 193 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 ARHGAP17Q68EM7 881 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 ISM2Q6H9L7 571 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 PRR23CQ6ZRP0 262 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 HTR3DQ70Z44 454 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 RASSF3Q86WH2 238 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 TMEM25Q86YD3 366 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 ELOA2Q8IYF1 753 aaPredicted RBP15.04■□□□□ -0
VTI1A-209ENST00000496445 CCDC33Q8N5R6 958 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 UBR7Q8N806 425 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 TSTD1Q8NFU3 115 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 CCDC26Q8TAB7 109 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 HEXIM2Q96MH2 286 aaKnown RBP15.04■□□□□ -0
VTI1A-209ENST00000496445 ZDHHC4Q9NPG8 344 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 ARHGEF4Q9NR80 690 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 SPHK2Q9NRA0 654 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 SPTBN2O15020 2390 aa15.04■□□□□ -0
VTI1A-209ENST00000496445 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 TRIM24O15164 1050 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 TULP3O75386 442 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 APODP05090 189 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 ATP5C1P36542 298 aaKnown RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 GRIA2P42262 883 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 KIR2DL1P43626 348 aaPredicted RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 MRPS21P82921 87 aaKnown RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 PLK5Q496M5 336 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 RAB41Q5JT25 222 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 EMC10Q5UCC4 262 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 KLHDC10Q6PID8 442 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 TMEM92Q6UXU6 159 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 TTC30AQ86WT1 665 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 TTC39CQ8N584 583 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 ALLCQ8N6M5 410 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 NAT16Q8N8M0 369 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 IL17RCQ8NAC3 791 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 TXNDC5Q8NBS9 432 aaKnown RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 P2RY11Q96G91 374 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 LOXL4Q96JB6 756 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 ZC3H10Q96K80 434 aaKnown RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 TPSD1Q9BZJ3 242 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 DUSP15Q9H1R2 295 aaPredicted RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 ARRDC1-AS1Q9H2J1 176 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 FAM124BQ9H5Z6 455 aaPredicted RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 ARMCX3Q9UH62 379 aaPredicted RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 CDV3Q9UKY7 258 aaKnown RBP15.03■□□□□ -0
VTI1A-209ENST00000496445 HCN2Q9UL51 889 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 SSUH2Q9Y2M2 353 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 THADAQ6YHU6 1953 aa15.03■□□□□ -0
VTI1A-209ENST00000496445 ABCA7Q8IZY2 2146 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 PPP1R3GB7ZBB8 358 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 SGK1O00141 431 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 TULP2O00295 520 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 PSMA7O14818 248 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 GDF9O60383 454 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 ADAM23O75077 832 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 KLF8O95600 359 aaPredicted RBP15.02■□□□□ -0
VTI1A-209ENST00000496445 TIE1P35590 1138 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 DGKEP52429 567 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 CCDC6Q16204 474 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 CRY1Q16526 586 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 ANO4Q32M45 955 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 ANO7Q6IWH7 933 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 TTI2Q6NXR4 508 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 Q6ZNB5 142 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 PIGZQ86VD9 579 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 MDGA1Q8NFP4 955 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 DHTKD1Q96HY7 919 aaPredicted RBP15.02■□□□□ -0
VTI1A-209ENST00000496445 CNOT6LQ96LI5 555 aaKnown RBP15.02■□□□□ -0
VTI1A-209ENST00000496445 GTPBP4Q9BZE4 634 aaKnown RBP15.02■□□□□ -0
VTI1A-209ENST00000496445 MARK1Q9P0L2 795 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 HOOK1Q9UJC3 728 aaKnown RBP15.02■□□□□ -0
VTI1A-209ENST00000496445 NAGPAQ9UK23 515 aa15.02■□□□□ -0
VTI1A-209ENST00000496445 NEDD8-MDP1E9PL57 170 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 STC2O76061 302 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 TNFRSF4P43489 277 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 FMO5P49326 533 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 PSEN1P49768 467 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 LRMPQ12912 555 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 STIM1Q13586 685 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 MORC3Q14149 939 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 GOLGA7BQ2TAP0 167 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 PLA2G2CQ5R387 149 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 C10orf120Q5SQS8 335 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms