RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	EXOC4	Q96A65	974 aa		11.52	□□□□□ -0.57
DCTN1-223	ENST00000495643	NACA2	Q9H009	215 aa		11.52	□□□□□ -0.57
DCTN1-223	ENST00000495643	HESX1	Q9UBX0	185 aa		11.52	□□□□□ -0.57
DCTN1-223	ENST00000495643	DNMT3L	Q9UJW3	386 aa		11.52	□□□□□ -0.57
DCTN1-223	ENST00000495643	NUDT5	Q9UKK9	219 aa		11.52	□□□□□ -0.57
DCTN1-223	ENST00000495643	SH3BP1	Q9Y3L3	701 aa		11.52	□□□□□ -0.57
DCTN1-223	ENST00000495643	OTOGL	Q3ZCN5	2332 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643		K7EQS6	105 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	MDM4	O15151	490 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	RNF40	O75150	1001 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	GABBR2	O75899	941 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	ZBED1	O96006	694 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	CALCA	P01258	141 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	SETSIP	P0DME0	302 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	RALA	P11233	206 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	ERCC5	P28715	1186 aa	Predicted RBP	11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	HOXA6	P31267	233 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	HOXC13	P31276	330 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	EIF2D	P41214	584 aa	Known RBP	11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	PLA2G4A	P47712	749 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	DMWD	Q09019	674 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	MESP2	Q0VG99	397 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	CNGA2	Q16280	664 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	C10orf120	Q5SQS8	335 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	LY6G5C	Q5SRR4	150 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	TRIM65	Q6PJ69	517 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	BHLHA9	Q7RTU4	235 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	GPT2	Q8TD30	523 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	SLC35F5	Q8WV83	523 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	KCTD13	Q8WZ19	329 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	THAP9	Q9H5L6	903 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	GVINP1	Q7Z2Y8	2422 aa		11.51	□□□□□ -0.57
DCTN1-223	ENST00000495643	EML5	Q05BV3	1969 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	EP300	Q09472	2414 aa	Predicted RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643		A0A0A0MRY4	1105 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	GTPBP10	A4D1E9	387 aa	Known RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	ATG13	O75143	517 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	ADH1C	P00326	375 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	CHRM1	P11229	460 aa	Predicted RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	ADH5	P11766	374 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	SLC9A1	P19634	815 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	BRD2	P25440	801 aa	Known RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	SLC6A11	P48066	632 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	YWHAG	P61981	247 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	STIL	Q15468	1287 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643		Q6ZNB5	142 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	RBM43	Q6ZSC3	357 aa	Known RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	TADA2B	Q86TJ2	420 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	C12orf40	Q86WS4	652 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	TMEM25	Q86YD3	366 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	CREBRF	Q8IUR6	639 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	SCML4	Q8N228	414 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	ARHGAP18	Q8N392	663 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	PHTF2	Q8N3S3	785 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	NDRG1	Q92597	394 aa	Known RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	IPO9	Q96P70	1041 aa	Known RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	GBP4	Q96PP9	640 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	CRACR2A	Q9BSW2	395 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	ULBP1	Q9BZM6	244 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	EPC1	Q9H2F5	836 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	SPHK2	Q9NRA0	654 aa		11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	PTPRZ1	P23471	2315 aa	Predicted RBP	11.5	□□□□□ -0.57
DCTN1-223	ENST00000495643	ANTXRL	A6NF34	631 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	HOXC11	O43248	304 aa	Predicted RBP	11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	STC2	O76061	302 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	KLKB1	P03952	638 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	PON1	P27169	355 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	MTIF2	P46199	727 aa	Known RBP	11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	FNTB	P49356	437 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	APBA1	Q02410	837 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	GAD2	Q05329	585 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	GOLGA8F	Q08AF8	430 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	GOLGA8DP	Q0D2H9	430 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	ADIG	Q0VDE8	80 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	EFEMP1	Q12805	493 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	TPD52L1	Q16890	204 aa	Predicted RBP	11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	PMF1	Q6P1K2	205 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	GJB7	Q6PEY0	223 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	GBP6	Q6ZN66	633 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	ENOSF1	Q7L5Y1	443 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	SYT13	Q7L8C5	426 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	LONP2	Q86WA8	852 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	MIB1	Q86YT6	1006 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	SFTPA1	Q8IWL2	248 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	ETFBKMT	Q8IXQ9	262 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	RPLP0P6	Q8NHW5	317 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	USP33	Q8TEY7	942 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	SECISBP2L	Q93073	1101 aa	Known RBP	11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	PNKP	Q96T60	521 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	LRRC4	Q9HBW1	653 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	DACH1	Q9UI36	760 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	LSM7	Q9UK45	103 aa	Known RBP	11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	DMXL1	Q9Y485	3027 aa		11.49	□□□□□ -0.57
DCTN1-223	ENST00000495643	GPR179	Q6PRD1	2367 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms