RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 NIPA2Q8N8Q9 360 aa16.41■□□□□ 0.22
PHF1-211ENST00000495509 HES6Q96HZ4 224 aa16.41■□□□□ 0.22
PHF1-211ENST00000495509 TBCBQ99426 244 aa16.41■□□□□ 0.22
PHF1-211ENST00000495509 DDX3YO15523 660 aaKnown RBP16.4■□□□□ 0.22
PHF1-211ENST00000495509 LRCH4O75427 683 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 C8AP07357 584 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 SDC4P31431 198 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 NOS2P35228 1153 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 SLC1A1P43005 524 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 EPHB3P54753 998 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
PHF1-211ENST00000495509 RPS6KA1Q15418 735 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 TXNRD3NBQ6F5E7 133 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 DNAJB7Q7Z6W7 309 aaPredicted RBP16.4■□□□□ 0.22
PHF1-211ENST00000495509 MON1AQ86VX9 555 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 ADAM32Q8TC27 787 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 SLC22A17Q8WUG5 538 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 ALG3Q92685 438 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 TTLL2Q9BWV7 592 aa16.4■□□□□ 0.22
PHF1-211ENST00000495509 COLQQ9Y215 455 aaPredicted RBP16.4■□□□□ 0.22
PHF1-211ENST00000495509 DPYSL4O14531 572 aa16.39■□□□□ 0.21
PHF1-211ENST00000495509 CAPN9O14815 690 aa16.39■□□□□ 0.21
PHF1-211ENST00000495509 MAN1A1P33908 653 aa16.39■□□□□ 0.21
PHF1-211ENST00000495509 PTPN9P43378 593 aa16.39■□□□□ 0.21
PHF1-211ENST00000495509 TERF1P54274 439 aa16.39■□□□□ 0.21
PHF1-211ENST00000495509 OTUD1Q5VV17 481 aaPredicted RBP16.39■□□□□ 0.21
PHF1-211ENST00000495509 PAPD7Q5XG87 772 aaKnown RBP16.39■□□□□ 0.21
PHF1-211ENST00000495509 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.39■□□□□ 0.21
PHF1-211ENST00000495509 FAM172AQ8WUF8 416 aa16.39■□□□□ 0.21
PHF1-211ENST00000495509 NT5C3BQ969T7 300 aa16.39■□□□□ 0.21
PHF1-211ENST00000495509 PCSK1NQ9UHG2 260 aa16.39■□□□□ 0.21
PHF1-211ENST00000495509 SYNJ2BP-COX16A0A087WUM0 186 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 ZNF185O15231 689 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 RFPL2O75678 378 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 URI1O94763 535 aaPredicted RBP16.38■□□□□ 0.21
PHF1-211ENST00000495509 CSH1P0DML2 217 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 CSH2P0DML3 217 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 IL1R2P27930 398 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 MIPP30301 263 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 PEX5P50542 639 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 HDAC4P56524 1084 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 AMPD2Q01433 879 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 SLC25A52Q3SY17 297 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 BTBD8Q5XKL5 378 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 CCDC149Q6ZUS6 474 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 CENPIQ92674 756 aaPredicted RBP16.38■□□□□ 0.21
PHF1-211ENST00000495509 GOLGA1Q92805 767 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 PSMG2Q969U7 264 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 CEP295NLQ96MC4 621 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 NPY6RQ99463 290 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 ZNF576Q9H609 170 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 TLE6Q9H808 572 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 ZNF334Q9HCZ1 680 aaPredicted RBP16.38■□□□□ 0.21
PHF1-211ENST00000495509 MAN1C1Q9NR34 630 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 ABCC13Q9NSE7 274 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 COMMD8Q9NX08 183 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 COX16Q9P0S2 106 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 SNX12Q9UMY4 172 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 REV3LO60673 3130 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 RNF8O76064 485 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 TBX18O95935 607 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 GTF2F1P35269 517 aaKnown RBP eCLIP16.38■□□□□ 0.211e-7■□□□□ 11.3
PHF1-211ENST00000495509 GJC1P36383 396 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 NRIP1P48552 1158 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 SULT1E1P49888 294 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 PLD1Q13393 1074 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 VEPH1Q14D04 833 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 TAF12Q16514 161 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 COG1Q8WTW3 980 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
PHF1-211ENST00000495509 MYRFLQ96LU7 910 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 PEBP4Q96S96 227 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 PCDHA3Q9Y5H8 950 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 HCFC2Q9Y5Z7 792 aa16.38■□□□□ 0.21
PHF1-211ENST00000495509 PRRC2BQ5JSZ5 2229 aaKnown RBP16.37■□□□□ 0.21
PHF1-211ENST00000495509 COL4A4P53420 1690 aaPredicted RBP16.37■□□□□ 0.21
PHF1-211ENST00000495509 M0QYT0 321 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 KCNK3O14649 394 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 CCL16O15467 120 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 LRG1P02750 347 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 ZDHHC11BP0C7U3 371 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 CTNNA1P35221 906 aaKnown RBP16.37■□□□□ 0.21
PHF1-211ENST00000495509 NME3Q13232 169 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 ACAP1Q15027 740 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 ZNF697Q5TEC3 545 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 DCAF12L1Q5VU92 463 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 SCYL2Q6P3W7 929 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 CYP4V2Q6ZWL3 525 aaPredicted RBP16.37■□□□□ 0.21
PHF1-211ENST00000495509 HS6ST3Q8IZP7 471 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 CASP10Q92851 521 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 SLITRK1Q96PX8 696 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 OSBPL9Q96SU4 736 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 ZWILCHQ9H900 591 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 TLR8Q9NR97 1041 aaKnown RBP16.37■□□□□ 0.21
PHF1-211ENST00000495509 SFMBT1Q9UHJ3 866 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 LCMT1Q9UIC8 334 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 SAR1BQ9Y6B6 198 aa16.37■□□□□ 0.21
PHF1-211ENST00000495509 ANAPC1Q9H1A4 1944 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms