RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 SLC28A3Q9HAS3 691 aa12.04□□□□□ -0.48
SLC13A3-211ENST00000495082 ABCC13Q9NSE7 274 aa12.04□□□□□ -0.48
SLC13A3-211ENST00000495082 CDC23Q9UJX2 597 aa12.04□□□□□ -0.48
SLC13A3-211ENST00000495082 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
SLC13A3-211ENST00000495082 MRFAP1Q9Y605 127 aa12.04□□□□□ -0.48
SLC13A3-211ENST00000495082 GBF1Q92538 1859 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 CAPN9O14815 690 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 ENDOD1O94919 500 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 GLUD1P00367 558 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 CSH1P0DML2 217 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 CSH2P0DML3 217 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 IRS1P35568 1242 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 PSEN1P49768 467 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 CLCN4P51793 760 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 TAS2R40P59535 323 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 SLC25A11Q02978 314 aaKnown RBP12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 VEPH1Q14D04 833 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 C15orf59Q2T9L4 293 aaPredicted RBP12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 DAB2IPQ5VWQ8 1189 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 GIPC2Q8TF65 315 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 FAM172AQ8WUF8 416 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 OVCA2Q8WZ82 227 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 FBXO32Q969P5 355 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 PGAP3Q96FM1 320 aaPredicted RBP12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 TRMT2BQ96GJ1 504 aaKnown RBP12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 PBKQ96KB5 322 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 CARD9Q9H257 536 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 CLIC5Q9NZA1 410 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 NAALADL1Q9UQQ1 740 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 CDH23Q9H251 3354 aa12.03□□□□□ -0.48
SLC13A3-211ENST00000495082 CHD9Q3L8U1 2897 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 KCNK3O14649 394 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 CSPG5O95196 566 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 ZDHHC11BP0C7U3 371 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 NCAM1P13591 858 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 HMGA1P17096 107 aaKnown RBP12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 MIPP30301 263 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 MARCKSL1P49006 195 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 HDAC4P56524 1084 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 RWDD2BP57060 319 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 ATP11AP98196 1134 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 TWF1Q12792 350 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 IFRD2Q12894 506 aaPredicted RBP12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 TAF10Q12962 218 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 MTMR3Q13615 1198 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 HADHQ16836 314 aaKnown RBP12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 SH3PXD2AQ5TCZ1 1133 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 OTUD1Q5VV17 481 aaPredicted RBP12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 SYPL2Q5VXT5 272 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 KATNAL2Q8IYT4 538 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 KREMEN2Q8NCW0 462 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 STKLD1Q8NE28 680 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 PDZD8Q8NEN9 1154 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 SLITRK1Q96PX8 696 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 TMEM51Q9NW97 253 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 GMIPQ9P107 970 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 ASB3Q9Y575 518 aa12.02□□□□□ -0.48
SLC13A3-211ENST00000495082 A0A1W2PQH9 124 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 SRGAP2O75044 1071 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 KRT7P08729 469 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 TCF4P15884 667 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 TFE3P19532 575 aaPredicted RBP12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 SULT1E1P49888 294 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 DNA2P51530 1060 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 EPHB3P54753 998 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 NAA30Q147X3 362 aaPredicted RBP12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 WHAMMP3Q1A5X7 153 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 DCAF12L1Q5VU92 463 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 SNX30Q5VWJ9 437 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 BTBD8Q5XKL5 378 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 ITIH5Q86UX2 942 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 CREG2Q8IUH2 290 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 SLC7A14Q8TBB6 771 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 COG1Q8WTW3 980 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 HDAC7Q8WUI4 952 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 ARNTL2Q8WYA1 636 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 PSMG2Q969U7 264 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 TIFAQ96CG3 184 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 TBCBQ99426 244 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 PSMB7Q99436 277 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 PLEKHA4Q9H4M7 779 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 NMUR1Q9HB89 426 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 TLR8Q9NR97 1041 aaKnown RBP12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 CHD7Q9P2D1 2997 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 RNF14Q9UBS8 474 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 USP18Q9UMW8 372 aa12.02□□□□□ -0.49
SLC13A3-211ENST00000495082 PLXNA3P51805 1871 aa12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 CLASP2O75122 1294 aaKnown RBP12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 TRUB2O95900 331 aaKnown RBP12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 F9P00740 461 aa12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 IGLV3-25P01717 112 aa12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 IL1R2P27930 398 aa12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 CXCR5P32302 372 aa12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 RDXP35241 583 aaKnown RBP12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 SSR1P43307 286 aaKnown RBP12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 PGFP49763 221 aa12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 CDO1Q16878 200 aa12.01□□□□□ -0.49
SLC13A3-211ENST00000495082 MSANTD2Q6P1R3 559 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms