RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CLIC5Q9NZA1 410 aa34.92■■■■□ 3.18
CBX4-203ENST00000494546 O00370 1275 aa34.91■■■■□ 3.18
CBX4-203ENST00000494546 XPO1O14980 1071 aaKnown RBP34.91■■■■□ 3.18
CBX4-203ENST00000494546 PAEPP09466 180 aa34.91■■■■□ 3.18
CBX4-203ENST00000494546 HTR3DQ70Z44 454 aa34.91■■■■□ 3.18
CBX4-203ENST00000494546 C12orf40Q86WS4 652 aa34.91■■■■□ 3.18
CBX4-203ENST00000494546 TFAP2BQ92481 460 aa34.91■■■■□ 3.18
CBX4-203ENST00000494546 NUP62CLQ9H1M0 184 aa34.91■■■■□ 3.18
CBX4-203ENST00000494546 LSM7Q9UK45 103 aaKnown RBP34.91■■■■□ 3.18
CBX4-203ENST00000494546 RIF1Q5UIP0 2472 aaKnown RBP34.91■■■■□ 3.18
CBX4-203ENST00000494546 PTPRZ1P23471 2315 aaPredicted RBP34.9■■■■□ 3.18
CBX4-203ENST00000494546 PLA2G4AP47712 749 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 SEC13P55735 322 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 GCNT1Q02742 428 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 GAD2Q05329 585 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 MIB1Q86YT6 1006 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 ARHGAP18Q8N392 663 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 DCLK2Q8N568 766 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 CDK5RAP1Q96SZ6 601 aaKnown RBP34.9■■■■□ 3.18
CBX4-203ENST00000494546 PNKPQ96T60 521 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 LRRC4Q9HBW1 653 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 NCDNQ9UBB6 729 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 ATG2BQ96BY7 2078 aa34.9■■■■□ 3.18
CBX4-203ENST00000494546 RNF225M0QZC1 329 aaPredicted RBP34.89■■■■□ 3.18
CBX4-203ENST00000494546 HOXA6P31267 233 aa34.89■■■■□ 3.18
CBX4-203ENST00000494546 PXNP49023 591 aaPredicted RBP34.89■■■■□ 3.18
CBX4-203ENST00000494546 ANO4Q32M45 955 aa34.89■■■■□ 3.18
CBX4-203ENST00000494546 PRR23BQ6ZRT6 265 aa34.89■■■■□ 3.18
CBX4-203ENST00000494546 RBBP8NLQ8NC74 664 aaPredicted RBP34.89■■■■□ 3.18
CBX4-203ENST00000494546 CCDC26Q8TAB7 109 aa34.89■■■■□ 3.18
CBX4-203ENST00000494546 ULBP1Q9BZM6 244 aa34.89■■■■□ 3.18
CBX4-203ENST00000494546 SPHK2Q9NRA0 654 aa34.89■■■■□ 3.18
CBX4-203ENST00000494546 RASAL2Q9UJF2 1139 aa34.89■■■■□ 3.18
CBX4-203ENST00000494546 FAM186AA6NE01 2351 aa34.89■■■■□ 3.18
CBX4-203ENST00000494546 K7EQS6 105 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 GREM1O60565 184 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 ZBED1O96006 694 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 SETSIPP0DME0 302 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 EIF2DP41214 584 aaKnown RBP34.88■■■■□ 3.17
CBX4-203ENST00000494546 YWHAGP61981 247 aaKnown RBP eCLIP34.88■■■■□ 3.17
CBX4-203ENST00000494546 KDSRQ06136 332 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 SRSF5Q13243 272 aaKnown RBP34.88■■■■□ 3.17
CBX4-203ENST00000494546 TPD52L1Q16890 204 aaPredicted RBP34.88■■■■□ 3.17
CBX4-203ENST00000494546 BTBD8Q5XKL5 378 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 CLEC17AQ6ZS10 378 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 TMEM25Q86YD3 366 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 ZNF276Q8N554 614 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 NAT16Q8N8M0 369 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 ACDQ96AP0 544 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 RAB23Q9ULC3 237 aa34.88■■■■□ 3.17
CBX4-203ENST00000494546 HRO43593 1189 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 CALCAP01258 141 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 BRD2P25440 801 aaKnown RBP34.87■■■■□ 3.17
CBX4-203ENST00000494546 ADIGQ0VDE8 80 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 EFEMP1Q12805 493 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 LPAL2Q16609 132 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 C2orf27AQ580R0 203 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 LCLAT1Q6UWP7 414 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 RSRC2Q7L4I2 434 aaKnown RBP34.87■■■■□ 3.17
CBX4-203ENST00000494546 WDR5BQ86VZ2 330 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 NDRG1Q92597 394 aaKnown RBP34.87■■■■□ 3.17
CBX4-203ENST00000494546 KREMEN1Q96MU8 473 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 IPO9Q96P70 1041 aaKnown RBP34.87■■■■□ 3.17
CBX4-203ENST00000494546 ARHGEF4Q9NR80 690 aa34.87■■■■□ 3.17
CBX4-203ENST00000494546 KAT7O95251 611 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 APODP05090 189 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 MESP2Q0VG99 397 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 SIM2Q14190 667 aaPredicted RBP34.86■■■■□ 3.17
CBX4-203ENST00000494546 DPCR1Q3MIW9 517 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 PM20D1Q6GTS8 502 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 SYT13Q7L8C5 426 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 SFTPA1Q8IWL2 248 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 USP33Q8TEY7 942 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 HHIPQ96QV1 700 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 ZSWIM1Q9BR11 485 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 CRACR2AQ9BSW2 395 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 LMBRD1Q9NUN5 540 aa34.86■■■■□ 3.17
CBX4-203ENST00000494546 ANTXRLA6NF34 631 aa34.85■■■■□ 3.17
CBX4-203ENST00000494546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP34.85■■■■□ 3.17
CBX4-203ENST00000494546 M0QYV0 167 aa34.85■■■■□ 3.17
CBX4-203ENST00000494546 HOXC11O43248 304 aaPredicted RBP34.85■■■■□ 3.17
CBX4-203ENST00000494546 CNR2P34972 360 aa34.85■■■■□ 3.17
CBX4-203ENST00000494546 PKDCCQ504Y2 493 aa34.85■■■■□ 3.17
CBX4-203ENST00000494546 IRF2BP1Q8IU81 584 aa34.85■■■■□ 3.17
CBX4-203ENST00000494546 SIX6OS1Q8N1H7 587 aa34.85■■■■□ 3.17
CBX4-203ENST00000494546 SECISBP2LQ93073 1101 aaKnown RBP34.85■■■■□ 3.17
CBX4-203ENST00000494546 UBE2TQ9NPD8 197 aaPredicted RBP34.85■■■■□ 3.17
CBX4-203ENST00000494546 WDR3Q9UNX4 943 aaKnown RBP eCLIP34.85■■■■□ 3.17
CBX4-203ENST00000494546 STC2O76061 302 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 HMBSP08397 361 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 KRT5P13647 590 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 DMC1Q14565 340 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 STILQ15468 1287 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 CNGA2Q16280 664 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 TPGS1Q6ZTW0 290 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 KIAA2013Q8IYS2 634 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 KCTD13Q8WZ19 329 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 MYOFQ9NZM1 2061 aa34.84■■■■□ 3.17
CBX4-203ENST00000494546 LCP1P13796 627 aa34.83■■■■□ 3.17
CBX4-203ENST00000494546 GRIA2P42262 883 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms