RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 RNF25Q96BH1 459 aaPredicted RBP21.53■■□□□ 1.04
KPNA1-210ENST00000494339 CALCOCO1Q9P1Z2 691 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 STK39Q9UEW8 545 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 GREB1Q4ZG55 1949 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 PRPSAP2O60256 369 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 ABLIM3O94929 683 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 ZRANB2O95218 330 aaKnown RBP eCLIP21.53■■□□□ 1.04
KPNA1-210ENST00000494339 SEC24AO95486 1093 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 TRUB2O95900 331 aaKnown RBP21.53■■□□□ 1.04
KPNA1-210ENST00000494339 KRT7P08729 469 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 H2AFXP16104 143 aaPredicted RBP21.53■■□□□ 1.04
KPNA1-210ENST00000494339 RPL10AP62906 217 aaKnown RBP21.53■■□□□ 1.04
KPNA1-210ENST00000494339 LONRF2Q1L5Z9 754 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 DENND5BQ6ZUT9 1274 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 GIPC2Q8TF65 315 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 CENPIQ92674 756 aaPredicted RBP21.53■■□□□ 1.04
KPNA1-210ENST00000494339 PLVAPQ9BX97 442 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 AP1M1Q9BXS5 423 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 TTC7AQ9ULT0 858 aaPredicted RBP21.53■■□□□ 1.04
KPNA1-210ENST00000494339 STAP1Q9ULZ2 295 aa21.53■■□□□ 1.04
KPNA1-210ENST00000494339 SYNJ2BP-COX16A0A087WUM0 186 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 TEX28O15482 410 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 LILRB3O75022 631 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 ATF2P15336 505 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 ATF6P18850 670 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 PGFP49763 221 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 MTMR3Q13615 1198 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 RAB33AQ14088 237 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 ODF2Q5BJF6 829 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 TPGS2Q68CL5 300 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 TMC7Q7Z402 723 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 MTERF4Q7Z6M4 381 aaKnown RBP21.52■■□□□ 1.04
KPNA1-210ENST00000494339 EXD1Q8NHP7 514 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 ADAM32Q8TC27 787 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 RAPGEF5Q92565 580 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 HSPH1Q92598 858 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 NPY6RQ99463 290 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 FBXO44Q9H4M3 255 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 ANKZF1Q9H8Y5 726 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 CYP4F11Q9HBI6 524 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.52■■□□□ 1.04
KPNA1-210ENST00000494339 RBM12Q9NTZ6 932 aaKnown RBP21.52■■□□□ 1.04
KPNA1-210ENST00000494339 COX16Q9P0S2 106 aa21.52■■□□□ 1.04
KPNA1-210ENST00000494339 M0QYT0 321 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 YWHAGP61981 247 aaKnown RBP eCLIP21.51■■□□□ 1.03
KPNA1-210ENST00000494339 OTUD1Q5VV17 481 aaPredicted RBP21.51■■□□□ 1.03
KPNA1-210ENST00000494339 CYP4V2Q6ZWL3 525 aaPredicted RBP21.51■■□□□ 1.03
KPNA1-210ENST00000494339 SLC7A14Q8TBB6 771 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 NT5C3BQ969T7 300 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 SPATA17Q96L03 361 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 PARD6BQ9BYG5 372 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 DDX56Q9NY93 547 aaKnown RBP21.51■■□□□ 1.03
KPNA1-210ENST00000494339 SCML2Q9UQR0 700 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.51■■□□□ 1.03
KPNA1-210ENST00000494339 TARSL2A2RTX5 802 aaKnown RBP21.51■■□□□ 1.03
KPNA1-210ENST00000494339 LRRD1A4D1F6 860 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 CXCL14O95715 111 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 CA3P07451 260 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 RARAP10276 462 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 TUFMP49411 452 aaKnown RBP21.51■■□□□ 1.03
KPNA1-210ENST00000494339 NME3Q13232 169 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 FBXO38Q6PIJ6 1188 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 STRADAQ7RTN6 431 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 ANKS1BQ7Z6G8 1248 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 NAP1L3Q99457 506 aaPredicted RBP21.51■■□□□ 1.03
KPNA1-210ENST00000494339 TCF25Q9BQ70 676 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 FNIP2Q9P278 1114 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 RWDD3Q9Y3V2 267 aa21.51■■□□□ 1.03
KPNA1-210ENST00000494339 PLXNA3P51805 1871 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 A0A1W2PQH9 124 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 KRIT1O00522 736 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 CNPP09543 421 aaKnown RBP21.5■■□□□ 1.03
KPNA1-210ENST00000494339 RHOXF2BP0C7M4 288 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 YWHAQP27348 245 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 ERVFC1P60507 584 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 SCD5Q86SK9 330 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 SLC13A5Q86YT5 568 aaPredicted RBP21.5■■□□□ 1.03
KPNA1-210ENST00000494339 GPR65Q8IYL9 337 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 RCOR2Q8IZ40 523 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 RBM41Q96IZ5 413 aaKnown RBP21.5■■□□□ 1.03
KPNA1-210ENST00000494339 SLITRK1Q96PX8 696 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 RHOXF2Q9BQY4 288 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 NMUR1Q9HB89 426 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 RXFP1Q9HBX9 757 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 ENTPD7Q9NQZ7 604 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 SSX2IPQ9Y2D8 614 aa21.5■■□□□ 1.03
KPNA1-210ENST00000494339 TCRBV7S2A1N4TA0A589 114 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 RTN3O95197 1032 aaPredicted RBP21.49■■□□□ 1.03
KPNA1-210ENST00000494339 RALAP11233 206 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 MCM3P25205 808 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 RBM10P98175 930 aaKnown RBP21.49■■□□□ 1.03
KPNA1-210ENST00000494339 CREMQ03060 361 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 BTBD8Q5XKL5 378 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 MFSD7Q6UXD7 560 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 FAM131BQ86XD5 332 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 POF1BQ8WVV4 589 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 NCAPGQ9BPX3 1015 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 HERPUD2Q9BSE4 406 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 HEMGNQ9BXL5 484 aa21.49■■□□□ 1.03
KPNA1-210ENST00000494339 UBE2OQ9C0C9 1292 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms