RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 DEC1Q9P2X7 70 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 NUP205Q92621 2012 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 CNOT1A5YKK6 2376 aaKnown RBP25.23■■□□□ 1.63
TTC3-224ENST00000494243 LNP1A1A4G5 178 aa25.22■■□□□ 1.63
TTC3-224ENST00000494243 TBC1D3BA6NDS4 549 aa25.22■■□□□ 1.63
TTC3-224ENST00000494243 TRIM24O15164 1050 aa25.22■■□□□ 1.63
TTC3-224ENST00000494243 KIF20AO95235 890 aa25.22■■□□□ 1.63
TTC3-224ENST00000494243 MCCD1P59942 119 aaPredicted RBP25.22■■□□□ 1.63
TTC3-224ENST00000494243 ANO4Q32M45 955 aa25.22■■□□□ 1.63
TTC3-224ENST00000494243 INTS8Q75QN2 995 aaKnown RBP25.22■■□□□ 1.63
TTC3-224ENST00000494243 EDEM2Q9BV94 578 aa25.22■■□□□ 1.63
TTC3-224ENST00000494243 NT5C1AQ9BXI3 368 aa25.22■■□□□ 1.63
TTC3-224ENST00000494243 NMUR1Q9HB89 426 aa25.22■■□□□ 1.63
TTC3-224ENST00000494243 POLMQ9NP87 494 aaPredicted RBP25.22■■□□□ 1.63
TTC3-224ENST00000494243 PATE3B3GLJ2 98 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 CYP26A1O43174 497 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 KCNK5O95279 499 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 ATP5C1P36542 298 aaKnown RBP25.21■■□□□ 1.63
TTC3-224ENST00000494243 ENPEPQ07075 957 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 KRBA2Q6ZNG9 492 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 FAM186BQ8IYM0 893 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 GUF1Q8N442 669 aaKnown RBP25.21■■□□□ 1.63
TTC3-224ENST00000494243 TERB1Q8NA31 727 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 KCNV2Q8TDN2 545 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 JAKMIP2Q96AA8 810 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 MBD1Q9UIS9 605 aaPredicted RBP25.21■■□□□ 1.63
TTC3-224ENST00000494243 MYH10P35580 1976 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 EPG5Q9HCE0 2579 aa25.21■■□□□ 1.63
TTC3-224ENST00000494243 C4orf47A7E2U8 309 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 CILPO75339 1184 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 ACO1P21399 889 aaKnown RBP25.2■■□□□ 1.62
TTC3-224ENST00000494243 PMLP29590 882 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 MAP7D1Q3KQU3 841 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 ZCWPW2Q504Y3 356 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 CYP2U1Q7Z449 544 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 HMGB4Q8WW32 186 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 CCDC47Q96A33 483 aaKnown RBP25.2■■□□□ 1.62
TTC3-224ENST00000494243 IMPG2Q9BZV3 1241 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 NIF3L1Q9GZT8 377 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 GOLPH3LQ9H4A5 285 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 PNPLA8Q9NP80 782 aa25.2■■□□□ 1.62
TTC3-224ENST00000494243 KHNYNO15037 678 aaKnown RBP25.19■■□□□ 1.62
TTC3-224ENST00000494243 PSMC2P35998 433 aaKnown RBP25.19■■□□□ 1.62
TTC3-224ENST00000494243 DHPSP49366 369 aaPredicted RBP25.19■■□□□ 1.62
TTC3-224ENST00000494243 ADAM9Q13443 819 aa25.19■■□□□ 1.62
TTC3-224ENST00000494243 PREPLQ4J6C6 727 aaPredicted RBP25.19■■□□□ 1.62
TTC3-224ENST00000494243 C10orf76Q5T2E6 689 aa25.19■■□□□ 1.62
TTC3-224ENST00000494243 MIB1Q86YT6 1006 aa25.19■■□□□ 1.62
TTC3-224ENST00000494243 ZNF513Q8N8E2 541 aaPredicted RBP25.19■■□□□ 1.62
TTC3-224ENST00000494243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.19■■□□□ 1.62
TTC3-224ENST00000494243 NUDT5Q9UKK9 219 aa25.19■■□□□ 1.62
TTC3-224ENST00000494243 STARD13Q9Y3M8 1113 aa25.19■■□□□ 1.62
TTC3-224ENST00000494243 PCDHA5Q9Y5H7 936 aa25.19■■□□□ 1.62
TTC3-224ENST00000494243 MYO18AQ92614 2054 aaKnown RBP25.19■■□□□ 1.62
TTC3-224ENST00000494243 LAMA1P25391 3075 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 KMT2BQ9UMN6 2715 aaPredicted RBP25.18■■□□□ 1.62
TTC3-224ENST00000494243 A0A1W2PQ27 194 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 A0A1W2PQ64 194 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 A0A1W2PQD8 194 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 A0A1W2PQH9 124 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 TCRBV21S2A2A0A5A6 115 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 CACNG3O60359 315 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 KRT13P13646 458 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 CD58P19256 250 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 RPL13P26373 211 aaKnown RBP25.18■■□□□ 1.62
TTC3-224ENST00000494243 KIF11P52732 1056 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 IRX4P78413 519 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 KLHDC10Q6PID8 442 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 SCD5Q86SK9 330 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 MMRN2Q9H8L6 949 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 TMEM8AQ9HCN3 771 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 MARK1Q9P0L2 795 aa25.18■■□□□ 1.62
TTC3-224ENST00000494243 BCCIPQ9P287 314 aaKnown RBP eCLIP25.18■■□□□ 1.62
TTC3-224ENST00000494243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 CDX4O14627 284 aaPredicted RBP25.17■■□□□ 1.62
TTC3-224ENST00000494243 MDM4O15151 490 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 KRT37O76014 449 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 RARGP13631 454 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 TRIM21P19474 475 aaKnown RBP25.17■■□□□ 1.62
TTC3-224ENST00000494243 PTGER3P43115 390 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 PPP1R26Q5T8A7 1209 aaPredicted RBP25.17■■□□□ 1.62
TTC3-224ENST00000494243 LPCAT2Q7L5N7 544 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 TMEFF1Q8IYR6 380 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 PIGKQ92643 395 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 SEMA4DQ92854 862 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 BBS2Q9BXC9 721 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 DUSP16Q9BY84 665 aa25.17■■□□□ 1.62
TTC3-224ENST00000494243 DNAJC17Q9NVM6 304 aaKnown RBP25.17■■□□□ 1.62
TTC3-224ENST00000494243 CIZ1Q9ULV3 898 aaPredicted RBP25.17■■□□□ 1.62
TTC3-224ENST00000494243 PLXND1Q9Y4D7 1925 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 A0A1W2PQF6 199 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 NEDD8-MDP1E9PL57 170 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 MAP3K13O43283 966 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 ZNF202O95125 648 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 TYRP14679 529 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 GABRG2P18507 467 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 PLA2G4AP47712 749 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 EGFLAMQ63HQ2 1017 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 GRAMD4Q6IC98 578 aa25.16■■□□□ 1.62
TTC3-224ENST00000494243 Q6ZNB5 142 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms