RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PCSK4Q6UW60 755 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 PTCHD4Q6ZW05 846 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 Q6ZWC4 215 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 KRT28Q7Z3Y7 464 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 MAVSQ7Z434 540 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 KCTD20Q7Z5Y7 419 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 TICAM2Q86XR7 235 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 RASAL3Q86YV0 1011 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 P3H2Q8IVL5 708 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 SMAP1Q8IYB5 467 aaPredicted RBP2.79□□□□□ -1.96
LMNB1-207ENST00000494185 FSTL5Q8N475 847 aaPredicted RBP2.79□□□□□ -1.96
LMNB1-207ENST00000494185 GALNT4Q8N4A0 578 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 VGLL2Q8N8G2 317 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 ZNF384Q8TF68 577 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 RFKQ969G6 155 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 LTV1Q96GA3 475 aaPredicted RBP2.79□□□□□ -1.96
LMNB1-207ENST00000494185 ZDHHC12Q96GR4 267 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 ZNF764Q96H86 408 aaPredicted RBP2.79□□□□□ -1.96
LMNB1-207ENST00000494185 HIST1H2AAQ96QV6 131 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 SENP7Q9BQF6 1050 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 C17orf80Q9BSJ5 609 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.79□□□□□ -1.96
LMNB1-207ENST00000494185 KLK15Q9H2R5 256 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 PPCSQ9HAB8 311 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 ZBTB26Q9HCK0 441 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 ASB6Q9NWX5 421 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 SH3BP4Q9P0V3 963 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 ARPP21Q9UBL0 812 aaPredicted RBP2.79□□□□□ -1.96
LMNB1-207ENST00000494185 DKK3Q9UBP4 350 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 DKK4Q9UBT3 224 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 CAPN11Q9UMQ6 739 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 NFU1Q9UMS0 254 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 GABRQQ9UN88 632 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 DRG1Q9Y295 367 aaKnown RBP2.79□□□□□ -1.96
LMNB1-207ENST00000494185 SNX14Q9Y5W7 946 aa2.79□□□□□ -1.96
LMNB1-207ENST00000494185 SALL3Q9BXA9 1300 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 TMEM232C9JQI7 657 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 MASP2O00187 686 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 NPHP1O15259 732 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 WDHD1O75717 1129 aaPredicted RBP2.78□□□□□ -1.96
LMNB1-207ENST00000494185 HGFP14210 728 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 CREB1P16220 341 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 CD53P19397 219 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 UQCRC1P31930 480 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 GKP32189 559 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 PLA2G5P39877 138 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 COPAP53621 1224 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 GPS1Q13098 491 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 CHAF1AQ13111 956 aaPredicted RBP2.78□□□□□ -1.96
LMNB1-207ENST00000494185 KCNAB1Q14722 419 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 SLC35G1Q2M3R5 365 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 GLE1Q53GS7 698 aaKnown RBP2.78□□□□□ -1.96
LMNB1-207ENST00000494185 DGKKQ5KSL6 1271 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 CC2D1BQ5T0F9 858 aaKnown RBP2.78□□□□□ -1.96
LMNB1-207ENST00000494185 L1TD1Q5T7N2 865 aaKnown RBP2.78□□□□□ -1.96
LMNB1-207ENST00000494185 FAXCQ5TGI0 409 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 SLC9A4Q6AI14 798 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 TMEM65Q6PI78 240 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 C1orf228Q6PIY5 440 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 CPXCR1Q8N123 301 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 NKAPQ8N5F7 415 aaKnown RBP2.78□□□□□ -1.96
LMNB1-207ENST00000494185 ANKRD42Q8N9B4 389 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 TERB1Q8NA31 727 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 MBD3L2Q8NHZ7 208 aaPredicted RBP2.78□□□□□ -1.96
LMNB1-207ENST00000494185 ZNF566Q969W8 418 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 KIAA1191Q96A73 305 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 GRAMD1AQ96CP6 724 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 SNX27Q96L92 541 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 CCDC17Q96LX7 622 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 BBC3Q96PG8 261 aaPredicted RBP2.78□□□□□ -1.96
LMNB1-207ENST00000494185 SNX18Q96RF0 628 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 FAM118BQ9BPY3 351 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 SLC25A32Q9H2D1 315 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 FNIP2Q9P278 1114 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 PGAP2Q9UHJ9 254 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 CA14Q9ULX7 337 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 ST3GAL5Q9UNP4 418 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 HPSEQ9Y251 543 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 MAN2B2Q9Y2E5 1009 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 PCDHGB2Q9Y5G2 931 aa2.78□□□□□ -1.96
LMNB1-207ENST00000494185 H0YIZ8 118 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 PODXLO00592 558 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 EXOC3O60645 756 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 TMEM225BP0DP42 221 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 ABCB4P21439 1286 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 MATN1P21941 496 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 MMP8P22894 467 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 ADRA1DP25100 572 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 EEF1GP26641 437 aaKnown RBP2.77□□□□□ -1.97
LMNB1-207ENST00000494185 SLC5A2P31639 672 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 ATICP31939 592 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 HALP42357 657 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 HSPA7P48741 367 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 EIF4A1P60842 406 aaKnown RBP2.77□□□□□ -1.97
LMNB1-207ENST00000494185 TUBA4AP68366 448 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 TIAL1Q01085 375 aaKnown RBP eCLIP2.77□□□□□ -1.97
LMNB1-207ENST00000494185 LY6KQ17RY6 165 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 MPEG1Q2M385 716 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 ALFQ53S48 1182 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms