RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MARSP56192 900 aaKnown RBP13.28□□□□□ -0.28
HSPG2-212ENST00000493940 PAK1Q13153 545 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 STIM1Q13586 685 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 GOLGA7BQ2TAP0 167 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 CCDC40Q4G0X9 1142 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 FOXR2Q6PJQ5 311 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 HTR3DQ70Z44 454 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 CCDC186Q7Z3E2 898 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 CCDC150Q8NCX0 1101 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 EHBP1Q8NDI1 1231 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 USP33Q8TEY7 942 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 HHIPQ96QV1 700 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 HINFPQ9BQA5 517 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 FAM126AQ9BYI3 521 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-212ENST00000493940 METTL14Q9HCE5 456 aaKnown RBP13.28□□□□□ -0.28
HSPG2-212ENST00000493940 PNPLA8Q9NP80 782 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 TSPAN16Q9UKR8 245 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 ADAMTS9Q9P2N4 1935 aa13.27□□□□□ -0.28
HSPG2-212ENST00000493940 NCOR2Q9Y618 2525 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 O00370 1275 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 HOXA6P31267 233 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 ATP5C1P36542 298 aaKnown RBP13.27□□□□□ -0.29
HSPG2-212ENST00000493940 NR1H3Q13133 447 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 C2orf27AQ580R0 203 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 GJB7Q6PEY0 223 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 WDR5BQ86VZ2 330 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 LONP2Q86WA8 852 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 ETFBKMTQ8IXQ9 262 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 CCDC33Q8N5R6 958 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 KIAA1958Q8N8K9 716 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 GTPBP4Q9BZE4 634 aaKnown RBP13.27□□□□□ -0.29
HSPG2-212ENST00000493940 ULBP1Q9BZM6 244 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 SPHK2Q9NRA0 654 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 NAGPAQ9UK23 515 aa13.27□□□□□ -0.29
HSPG2-212ENST00000493940 A0A0A0MRY4 1105 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 PIK3R2O00459 728 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 DCLK1O15075 740 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 STC2O76061 302 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 ADH5P11766 374 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 BRD2P25440 801 aaKnown RBP13.26□□□□□ -0.29
HSPG2-212ENST00000493940 KIR2DL1P43626 348 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-212ENST00000493940 NRLP54845 237 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 KDSRQ06136 332 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 DMC1Q14565 340 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 C10orf120Q5SQS8 335 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 PM20D1Q6GTS8 502 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 TMEM270Q6UE05 265 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 Q6ZNB5 142 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 SYT13Q7L8C5 426 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 MIB1Q86YT6 1006 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 PPM1KQ8N3J5 372 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 UBXN6Q9BZV1 441 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 ACP6Q9NPH0 428 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 LMBRD1Q9NUN5 540 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 AJAP1Q9UKB5 411 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-212ENST00000493940 SH3BP1Q9Y3L3 701 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 PCDHB4Q9Y5E5 795 aa13.26□□□□□ -0.29
HSPG2-212ENST00000493940 BICDL2A1A5D9 508 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 YJEFN3A6XGL0 299 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 E7ENQ6 273 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 SGK1O00141 431 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 SLC9A3R1O14745 358 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-212ENST00000493940 XPO1O14980 1071 aaKnown RBP13.25□□□□□ -0.29
HSPG2-212ENST00000493940 ADAM23O75077 832 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 TULP3O75386 442 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 HMBSP08397 361 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 VDRP11473 427 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 CD19P15391 556 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 SLC9A1P19634 815 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 SDHBP21912 280 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 TIE1P35590 1138 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 PPP1R2P41236 205 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 RGS7P49802 495 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 TKTL1P51854 596 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 ZNF132P52740 706 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 AMPD2Q01433 879 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 SIM2Q14190 667 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-212ENST00000493940 RSPO4Q2I0M5 234 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-212ENST00000493940 SGO2Q562F6 1265 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 DPY19L2P1Q6NXN4 242 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 PMF1Q6P1K2 205 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 PRR23BQ6ZRT6 265 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 TPGS1Q6ZTW0 290 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 TOGARAM2Q6ZUX3 1019 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 KBTBD6Q86V97 674 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 DDX42Q86XP3 938 aaKnown RBP eCLIP13.25□□□□□ -0.29
HSPG2-212ENST00000493940 ZNF276Q8N554 614 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 FAM160A2Q8N612 972 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-212ENST00000493940 GPR161Q8N6U8 529 aaKnown RBP13.25□□□□□ -0.29
HSPG2-212ENST00000493940 TRIML1Q8N9V2 468 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 IL17RCQ8NAC3 791 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 CLEC4CQ8WTT0 213 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 NT5C1BQ96P26 610 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 PNKPQ96T60 521 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 INTS2Q9H0H0 1204 aaKnown RBP13.25□□□□□ -0.29
HSPG2-212ENST00000493940 CLSTN2Q9H4D0 955 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 TBC1D14Q9P2M4 693 aa13.25□□□□□ -0.29
HSPG2-212ENST00000493940 RWDD2AQ9UIY3 292 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms