RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SPDYAQ5MJ70 313 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TRAF7Q6Q0C0 670 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 SLC30A10Q6XR72 485 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 SETD3Q86TU7 594 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TTC7BQ86TV6 843 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 IRF2BP1Q8IU81 584 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 UNC45BQ8IWX7 931 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 AHI1Q8N157 1196 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ASCC1Q8N9N2 400 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 RBM15BQ8NDT2 890 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 NCOA7Q8NI08 942 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 SCFD1Q8WVM8 642 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 WRNIP1Q96S55 665 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 EPB41L4BQ9H329 900 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 RNPEPQ9H4A4 650 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 WASH6PQ9NQA3 447 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 PLK2Q9NYY3 685 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 SEPT3Q9UH03 358 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 PCDHA4Q9UN74 947 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 COL4A5P29400 1685 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 PCM1Q15154 2024 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ABCB11O95342 1321 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 RPTORQ8N122 1335 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 FAM187AA6NFU0 413 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 I3L4J1 428 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 FCHO1O14526 889 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 EPHB6O15197 1021 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ZBTB43O43298 467 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ATMINO43313 823 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 PRAMEP78395 509 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 MOGSQ13724 837 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 LLGL1Q15334 1064 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 SLC15A2Q16348 729 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 CRY2Q49AN0 593 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 GPR107Q5VW38 600 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 MFSD5Q6N075 450 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ALKBH2Q6NS38 261 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 APOA5Q6Q788 366 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 PRR23BQ6ZRT6 265 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 FBXO33Q7Z6M2 555 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 NDUFAF2Q8N183 169 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 SLC15A4Q8N697 577 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 SEPT1Q8WYJ6 367 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 METTL2AQ96IZ6 378 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 CHID1Q9BWS9 393 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TRIT1Q9H3H1 467 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 FBXO40Q9UH90 709 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TMEM59LQ9UK28 342 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ADAMTS6Q9UKP5 1117 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ERGIC3Q9Y282 383 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 SLC4A4Q9Y6R1 1079 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 UTRNP46939 3433 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 M0R2N6 131 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ENPP3O14638 875 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 BUD23O43709 281 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 MTA2O94776 668 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 CRTAMO95727 393 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 IFIT1P09914 478 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ALOX5P09917 674 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 NAMPTP43490 491 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 CBX5P45973 191 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 WDR4P57081 412 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 BORAQ6PGQ7 559 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TLK2Q86UE8 772 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF579Q8NAF0 562 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 GIMAP5Q96F15 307 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 CFAP57Q96MR6 1250 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TMEM79Q9BSE2 394 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 BEGAINQ9BUH8 593 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TMEM120AQ9BXJ8 343 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 GPAMQ9HCL2 828 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TUFT1Q9NNX1 390 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 AVENQ9NQS1 362 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 DCAF16Q9NXF7 216 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ZDHHC7Q9NXF8 308 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 EMC3Q9P0I2 261 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 DNAJB4Q9UDY4 337 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TRPC5Q9UL62 973 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 DOCK5Q9H7D0 1870 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 C2orf71A6NGG8 1288 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 UBE2Q2LH0YL09 131 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 M0QX08 132 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 ALOX15BO15296 676 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 NDUFS2O75306 463 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 CDH16O75309 829 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 PAHP00439 452 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 GH2P01242 217 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 CDH1P12830 882 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 PDE6AP16499 860 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 ITIH1P19827 911 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 RPL21P46778 160 aaKnown RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 KLRC3Q07444 240 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 SELENBP1Q13228 472 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 PUM3Q15397 648 aaKnown RBP7.09□□□□□ -1.27
VPS13B-205ENST00000493587 MOGQ16653 247 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 FAM205BPQ63HN1 556 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
VPS13B-205ENST00000493587 PDCD6IPQ8WUM4 868 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms