RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 IL33O95760 270 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 CHRM5P08912 532 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-218ENST00000493430 LRPAP1P30533 357 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 VIPR2P41587 438 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 POLGP54098 1239 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-218ENST00000493430 FOXG1P55316 489 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-218ENST00000493430 RABEP1Q15276 862 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 L1TD1Q5T7N2 865 aaKnown RBP3.99□□□□□ -1.77
PTCD3-218ENST00000493430 FCRL6Q6DN72 434 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 KRT28Q7Z3Y7 464 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 TECPR1Q7Z6L1 1165 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 CATIPQ7Z7H3 387 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 KRT73Q86Y46 540 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 TERB1Q8NA31 727 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 MTFMTQ96DP5 389 aaKnown RBP3.99□□□□□ -1.77
PTCD3-218ENST00000493430 HSPBAP1Q96EW2 488 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 CDK5RAP3Q96JB5 506 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 RITA1Q96K30 269 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 ASPSCR1Q9BZE9 553 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 PDGFCQ9NRA1 345 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 XPR1Q9UBH6 696 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 PCDHA6Q9UN73 950 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 CHD4Q14839 1912 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 LRP5O75197 1615 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 CDK12Q9NYV4 1490 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-218ENST00000493430 C4AP0C0L4 1744 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 C4BP0C0L5 1744 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 PKD1L3Q7Z443 1732 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 RPGRIP1LQ68CZ1 1315 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 ANKARQ7Z5J8 1434 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 UBE2Q2LH0YL09 131 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 hCG_1984214I3L0E3 225 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 PDE8BO95263 885 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 NTN1O95631 604 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 PRKCBP05771 671 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 CYP2C9P11712 490 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 AKAP5P24588 427 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 PDE6CP51160 858 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 TMEM240Q5SV17 173 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 KIRREL2Q6UWL6 708 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 ZNF517Q6ZMY9 492 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-218ENST00000493430 DEFB132Q7Z7B7 95 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 SLC15A3Q8IY34 581 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 SOCS4Q8WXH5 440 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 MVB12AQ96EY5 273 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 SNX18Q96RF0 628 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 THAP7Q9BT49 309 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-218ENST00000493430 DPCDQ9BVM2 203 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-218ENST00000493430 GTPBP4Q9BZE4 634 aaKnown RBP3.98□□□□□ -1.77
PTCD3-218ENST00000493430 TFCP2L1Q9NZI6 479 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 GABRQQ9UN88 632 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 MRPS17Q9Y2R5 130 aaKnown RBP3.98□□□□□ -1.77
PTCD3-218ENST00000493430 LUC7L2Q9Y383 392 aaKnown RBP3.98□□□□□ -1.77
PTCD3-218ENST00000493430 UBR3Q6ZT12 1888 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 KIAA0232Q92628 1395 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 QSER1Q2KHR3 1735 aa3.98□□□□□ -1.77
PTCD3-218ENST00000493430 COL5A2P05997 1499 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-218ENST00000493430 NPHP3Q7Z494 1330 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 N4BP2Q86UW6 1770 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-218ENST00000493430 SCN11AQ9UI33 1791 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 PAPPAQ13219 1627 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 MYO1CO00159 1063 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 BCAR3O75815 825 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 USP1O94782 785 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 THP07101 528 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 CYP2A6P11509 494 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-218ENST00000493430 XRCC6P12956 609 aaKnown RBP eCLIP3.97□□□□□ -1.77
PTCD3-218ENST00000493430 VCAM1P19320 739 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 IL1R2P27930 398 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 ZNF260Q3ZCT1 412 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 DEPDC1Q5TB30 811 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 SERPINA13PQ6UXR4 307 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 NANOGP1Q8N7R0 232 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 OSCP1Q8WVF1 389 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 LRRC59Q96AG4 307 aaKnown RBP3.97□□□□□ -1.77
PTCD3-218ENST00000493430 LENG8Q96PV6 779 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-218ENST00000493430 FAM118BQ9BPY3 351 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 TRNAU1APQ9NX07 287 aaKnown RBP3.97□□□□□ -1.77
PTCD3-218ENST00000493430 TMX2Q9Y320 296 aa3.97□□□□□ -1.77
PTCD3-218ENST00000493430 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.97□□□□□ -1.77
PTCD3-218ENST00000493430 ACEP12821 1306 aa3.96□□□□□ -1.77
PTCD3-218ENST00000493430 USP6P35125 1406 aa3.96□□□□□ -1.77
PTCD3-218ENST00000493430 COL5A3P25940 1745 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-218ENST00000493430 MYMKA6NI61 221 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 E5RJQ4 531 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 INSIG1O15503 277 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 CSF1RP07333 972 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 SNHG28P0DPA3 235 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 UCP3P55916 312 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 MYO1EQ12965 1108 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 MGAT5BQ3V5L5 792 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 MRPL10Q7Z7H8 261 aaKnown RBP3.96□□□□□ -1.78
PTCD3-218ENST00000493430 PIGOQ8TEQ8 1089 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 MAP3K14Q99558 947 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 CDK19Q9BWU1 502 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 CIPCQ9C0C6 399 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 CXorf36Q9H7Y0 433 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 CNNM1Q9NRU3 951 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 TRMT13Q9NUP7 481 aaKnown RBP3.96□□□□□ -1.78
PTCD3-218ENST00000493430 KLHL13Q9P2N7 655 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms