RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 F9P00740 461 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 UBL4AP11441 157 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 GLULP15104 373 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 RBL1P28749 1068 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 ADORA2AP29274 412 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 FHL3Q13643 280 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 E2F2Q14209 437 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 PLCB4Q15147 1175 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 CERCAMQ5T4B2 595 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 KRT27Q7Z3Y8 459 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 SUN3Q8TAQ9 357 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 POC1BQ8TC44 478 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 SLC22A17Q8WUG5 538 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 ZDHHC12Q96GR4 267 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 TMEM176AQ96HP8 235 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 RADILQ96JH8 1075 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 TTC14Q96N46 770 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 ASB2Q96Q27 587 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 WDR24Q96S15 920 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 YME1L1Q96TA2 773 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 DIAPH3Q9NSV4 1193 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 GIMAP2Q9UG22 337 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 RPS6KA6Q9UK32 745 aa5.15□□□□□ -1.58
VPS13A-212ENST00000493341 AATKQ6ZMQ8 1374 aa5.15□□□□□ -1.59
VPS13A-212ENST00000493341 SLC38A8A6NNN8 435 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 GTPBP1O00178 669 aaKnown RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 B4GALT4O60513 344 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 GUCY1B2O75343 617 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 SCGB1D1O95968 90 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 DRD1P21728 446 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 MGAT1P26572 445 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 UQCRC1P31930 480 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 GSTM5P46439 218 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 HARS2P49590 506 aaKnown RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 CAMK1Q14012 370 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PSMD6Q15008 389 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 TMEM196Q5HYL7 178 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 NAA35Q5VZE5 725 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 ANKRD40Q6AI12 368 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 KLHL24Q6TFL4 600 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PIK3AP1Q6ZUJ8 805 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 GPRIN1Q7Z2K8 1008 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PXKQ7Z7A4 578 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 ATRIPQ8WXE1 791 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 REXO5Q96IC2 774 aaKnown RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PNKPQ96T60 521 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 DPYSL5Q9BPU6 564 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 FUZQ9BT04 418 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 ITPAQ9BY32 194 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 TTYH1Q9H313 450 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 STN1Q9H668 368 aaKnown RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 GCM1Q9NP62 436 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 ZNF215Q9UL58 517 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 SLC27A6Q9Y2P4 619 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 SAC3D1A6NKF1 404 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 M0QYT0 321 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 MATN2O00339 956 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 BIN1O00499 593 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 TSPAN4O14817 238 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 CSF1RP07333 972 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 WEE2P0C1S8 567 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PEPDP12955 493 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PRKCHP24723 683 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 CDK7P50613 346 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 RAC3P60763 192 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 MC2RQ01718 297 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 SLC30A6Q6NXT4 461 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PRR23BQ6ZRT6 265 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 KBTBD2Q8IY47 623 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 ELOA2Q8IYF1 753 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 GPR135Q8IZ08 494 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 LRRC71Q8N4P6 559 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 ZNF483Q8TF39 744 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 FTOQ9C0B1 505 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 REXO4Q9GZR2 422 aaKnown RBP5.14□□□□□ -1.59
VPS13A-212ENST00000493341 SYNCQ9H7C4 482 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PLA2G3Q9NZ20 509 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 TBC1D14Q9P2M4 693 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 RCE1Q9Y256 329 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 GDAQ9Y2T3 454 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 PCDHA10Q9Y5I2 948 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 IRAK3Q9Y616 596 aa5.14□□□□□ -1.59
VPS13A-212ENST00000493341 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.13□□□□□ -1.59
VPS13A-212ENST00000493341 CDC14BO60729 498 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 DKC1O60832 514 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS13A-212ENST00000493341 SUN1O94901 812 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 HEXIM1O94992 359 aaKnown RBP5.13□□□□□ -1.59
VPS13A-212ENST00000493341 CLEC3BP05452 202 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 GCSHP23434 173 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 THBS4P35443 961 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 PBX1P40424 430 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 MTHFSP49914 203 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 MC1RQ01726 317 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 DLX2Q07687 328 aaPredicted RBP5.13□□□□□ -1.59
VPS13A-212ENST00000493341 TBL3Q12788 808 aaKnown RBP5.13□□□□□ -1.59
VPS13A-212ENST00000493341 MYBPC2Q14324 1141 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 BECN1Q14457 450 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 CBWD5Q5RIA9 395 aa5.13□□□□□ -1.59
VPS13A-212ENST00000493341 DEPDC1Q5TB30 811 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms