RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 VPS28Q9UK41 221 aa6.52□□□□□ -1.36
NF1-215ENST00000493220 ARIH1Q9Y4X5 557 aaPredicted RBP6.52□□□□□ -1.36
NF1-215ENST00000493220 PHF2O75151 1096 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 ATP5BP06576 529 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 EPHB4P54760 987 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 TWF1Q12792 350 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 HHATQ5VTY9 493 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 RETSATQ6NUM9 610 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 TAB3Q8N5C8 712 aaPredicted RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 WHAMMQ8TF30 809 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 DCUN1D1Q96GG9 259 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SCYL1Q96KG9 808 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 NUDCD1Q96RS6 583 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 BFARQ9NZS9 450 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 NCKAP1Q9Y2A7 1128 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 CCL16O15467 120 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 KDM1AO60341 852 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SOD2P04179 222 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 HDCP19113 662 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 POLR2EP19388 210 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 TKTP29401 623 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 CXCR5P32302 372 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 MSH2P43246 934 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SESN3P58005 492 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 KLC3Q6P597 504 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 CCDC13Q8IYE1 715 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 C17orf53Q8N3J3 647 aaPredicted RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 VPS37AQ8NEZ2 397 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 TPCN2Q8NHX9 752 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SLC20A1Q8WUM9 679 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 USP6NLQ92738 828 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 KAT2BQ92831 832 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 PABPC5Q96DU9 382 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 CDCA3Q99618 268 aaPredicted RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 CHP1Q99653 195 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SFMBT1Q9UHJ3 866 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SIK3Q9Y2K2 1263 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 HAS3O00219 553 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 ADAMTS3O15072 1205 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 PRKCIP41743 596 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 ILF2Q12905 390 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 SLC10A6Q3KNW5 377 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 FAM26DQ5JW98 314 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 MIIPQ5JXC2 388 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 RAPH1Q70E73 1250 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 ZNF571Q7Z3V5 609 aaPredicted RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 PHF13Q86YI8 300 aaPredicted RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 KRT222Q8N1A0 295 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 C1orf127Q8N9H9 656 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 PYROXD1Q8WU10 500 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SCG3Q8WXD2 468 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 RABGGTAQ92696 567 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 ZBTB10Q96DT7 871 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 ZFP42Q96MM3 310 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 FAM129AQ9BZQ8 928 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 DMAC2Q9NW81 257 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 NSMCE4AQ9NXX6 385 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 AAR2Q9Y312 384 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 STYXL1Q9Y6J8 313 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 TBC1D4O60343 1298 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 NOL3O60936 208 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 ZNF623O75123 536 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 STAU1O95793 577 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 CSF2RAP15509 400 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 TCF3P15923 654 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 ZNF662Q6ZS27 426 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 KREMEN2Q8NCW0 462 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 WNT8BQ93098 351 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SKA1Q96BD8 255 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 TMA16Q96EY4 203 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 PPP1R16AQ96I34 528 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 VPS39Q96JC1 886 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 HNRNPABQ99729 332 aaKnown RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 FRMD8Q9BZ67 464 aaPredicted RBP6.52□□□□□ -1.37
NF1-215ENST00000493220 PPCSQ9HAB8 311 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 RABL2BQ9UNT1 228 aa6.52□□□□□ -1.37
NF1-215ENST00000493220 SIGLEC16A6NMB1 481 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 RGS16O15492 202 aaPredicted RBP6.51□□□□□ -1.37
NF1-215ENST00000493220 ATMINO43313 823 aaPredicted RBP6.51□□□□□ -1.37
NF1-215ENST00000493220 FGF18O76093 207 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 NFATC1O95644 943 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 CHRNA1P02708 482 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 RALBP11234 206 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 HTR7P34969 479 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 NR2C2P49116 596 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 LILRA4P59901 499 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 MRPS5P82675 430 aaKnown RBP6.51□□□□□ -1.37
NF1-215ENST00000493220 PDE1BQ01064 536 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 MLLT1Q03111 559 aaPredicted RBP6.51□□□□□ -1.37
NF1-215ENST00000493220 MAPK7Q13164 816 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 BRMS1LQ5PSV4 323 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 LCLAT1Q6UWP7 414 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 EGFL6Q8IUX8 553 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 DEFB106AQ8N104 65 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 SHC3Q92529 594 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 PLD4Q96BZ4 506 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 ZSWIM1Q9BR11 485 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 GANQ9H2C0 597 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 MOSPD1Q9UJG1 213 aa6.51□□□□□ -1.37
NF1-215ENST00000493220 TLK1Q9UKI8 766 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms