RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 HHLA1C9JL84 531 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 SGK1O00141 431 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 CAPN9O14815 690 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 SYN3O14994 580 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 TADA2AO75478 443 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 CXCL10P02778 98 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 PECAM1P16284 738 aaPredicted RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 TFE3P19532 575 aaPredicted RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 BDNFP23560 247 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 KLRC2P26717 231 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 NDUFV1P49821 464 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 ITGA8P53708 1063 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 ATXN1P54253 815 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 PMS2P54278 862 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 EIF3EP60228 445 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 SLMAPQ14BN4 828 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 NOMO1Q15155 1222 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 DPYSL2Q16555 572 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 CA9Q16790 459 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 DCAF6Q58WW2 860 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 ZC3H12AQ5D1E8 599 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 ERMARDQ5T6L9 678 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 OTUD1Q5VV17 481 aaPredicted RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 RHBDF2Q6PJF5 856 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 SLC39A5Q6ZMH5 540 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 CEP128Q6ZU80 1094 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 GPRIN1Q7Z2K8 1008 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 NPAS4Q8IUM7 802 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 SPATA2LQ8IUW3 424 aaPredicted RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 PSTKQ8IV42 348 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 DCP1BQ8IZD4 617 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 RIN2Q8WYP3 895 aaPredicted RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 NDRG1Q92597 394 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 ZBTB9Q96C00 473 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 FAF2Q96CS3 445 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 CASD1Q96PB1 797 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 RNF157Q96PX1 679 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 TMEM209Q96SK2 561 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 NPY6RQ99463 290 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 TRIM62Q9BVG3 475 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 COLEC11Q9BWP8 271 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 MRPL9Q9BYD2 267 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 RHOBTB2Q9BYZ6 727 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 TSPYL1Q9H0U9 437 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 DHX35Q9H5Z1 703 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 NRDE2Q9H7Z3 1164 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 TMEM30AQ9NV96 361 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 TMLHEQ9NVH6 421 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 RRN3Q9NYV6 651 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 VPS18Q9P253 973 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 DNAJB4Q9UDY4 337 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 ANAPC5Q9UJX4 755 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 ATP8A1Q9Y2Q0 1164 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 GOLGA6L10A6NI86 522 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 M0QYT0 321 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 DNALI1O14645 258 aaPredicted RBP9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 NRP1O14786 923 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 ZBED1O96006 694 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 LTFP02788 710 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 USP17L7P0C7H9 530 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 ZFXP17010 805 aaPredicted RBP9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 CYP2F1P24903 491 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 IVDP26440 423 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 GATMP50440 423 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 CDR1P51861 262 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 RABGGTBP53611 331 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 CCL23P55773 120 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 ROR1Q01973 937 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 DEUP1Q05D60 604 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 TCTN1Q2MV58 587 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 TRIM60Q495X7 471 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 ANKRD20A8PQ5CZ79 823 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 PPP6R3Q5H9R7 873 aaPredicted RBP9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 DENND2CQ68D51 928 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 SLC9A4Q6AI14 798 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 HFE2Q6ZVN8 426 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 BNIPLQ7Z465 357 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 SCML4Q8N228 414 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 CCDC185Q8N715 623 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 SLC7A14Q8TBB6 771 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 RSAD2Q8WXG1 361 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 P3H4Q92791 437 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 NT5C3BQ969T7 300 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 SCLYQ96I15 445 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 KCNK16Q96T55 309 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 TMEM175Q9BSA9 504 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 ADAM33Q9BZ11 813 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 PPP1R12CQ9BZL4 782 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 FOXP3Q9BZS1 431 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 ZCWPW1Q9H0M4 648 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 RCOR3Q9P2K3 495 aaPredicted RBP9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 ADAM28Q9UKQ2 775 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 FZD10Q9ULW2 581 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 SF3B1O75533 1304 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 KIAA1671Q9BY89 1806 aa9.52□□□□□ -0.89
SMARCC1-208ENST00000492896 CENPFP49454 3210 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms