RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	IGLV3-19	P01714	112 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	KRT7	P08729	469 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	THEGL	P0DJG4	465 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	NAMPT	P43490	491 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	GUCY2F	P51841	1108 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	BCAT1	P54687	386 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	MLLT10	P55197	1068 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	RACK1	P63244	317 aa	Known RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	KCNAB2	Q13303	367 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	MORC3	Q14149	939 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.76	□□□□□ -1.49	2e-6	■■■■■ 27.8
SEC13-219	ENST00000492602	ISX	Q2M1V0	245 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	SLC10A6	Q3KNW5	377 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	SEZ6	Q53EL9	994 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	RNF20	Q5VTR2	975 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	SFMBT2	Q5VUG0	894 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	APOA5	Q6Q788	366 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	TMC6	Q7Z403	805 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	METTL23	Q86XA0	190 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	TMEM25	Q86YD3	366 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	DCP1B	Q8IZD4	617 aa	Known RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	MMP21	Q8N119	569 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	KIAA1958	Q8N8K9	716 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	RDH13	Q8NBN7	331 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	MCPH1	Q8NEM0	835 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	SPDYE1	Q8NFV5	336 aa	Predicted RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	ATXN7L3B	Q96GX2	97 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	PRR11	Q96HE9	360 aa	Predicted RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	SLC6A18	Q96N87	628 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	RNF38	Q9H0F5	515 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	ZNF71	Q9NQZ8	489 aa	Predicted RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	GDF3	Q9NR23	364 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	TMLHE	Q9NVH6	421 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	TBC1D14	Q9P2M4	693 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	VPS4A	Q9UN37	437 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	PCDHGA8	Q9Y5G5	932 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	PCDHGA4	Q9Y5G9	962 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	RBM8A	Q9Y5S9	174 aa	Known RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	ZFC3H1	O60293	1989 aa	Known RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	LRRK1	Q38SD2	2015 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	GOLGA8A	A7E2F4	631 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	GOLGA8B	A8MQT2	603 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602		K7ERI5	159 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	TRIM38	O00635	465 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	PPEF2	O14830	753 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	SGSM2	O43147	1006 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	NOBOX	O60393	691 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	DTNB	O60941	627 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	ABL1	P00519	1130 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	WNT1	P04628	370 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	CENPB	P07199	599 aa	Predicted RBP	5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	MCF2	P10911	925 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	GNLY	P22749	145 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	CYP2F1	P24903	491 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	CDC27	P30260	824 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	EFNA5	P52803	228 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	COPA	P53621	1224 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	POLE2	P56282	527 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	LILRA4	P59901	499 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	SLC7A9	P82251	487 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	HS1BP3	Q53T59	392 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	MANEA	Q5SRI9	462 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	MOXD1	Q6UVY6	613 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	C14orf80	Q86SX3	495 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	CLEC14A	Q86T13	490 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	CCDC148	Q8NFR7	591 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	HTR3C	Q8WXA8	447 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	XPO6	Q96QU8	1125 aa	Known RBP	5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	ACO2	Q99798	780 aa	Known RBP	5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	ORAI3	Q9BRQ5	295 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	FUCA2	Q9BTY2	467 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	C22orf23	Q9BZE7	217 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	TRIM9	Q9C026	710 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	BTBD1	Q9H0C5	482 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	GZF1	Q9H116	711 aa	Predicted RBP	5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	PTPRH	Q9HD43	1115 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	KCNMB3	Q9NPA1	279 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	SPHK2	Q9NRA0	654 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	AASDHPPT	Q9NRN7	309 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	CUEDC1	Q9NWM3	386 aa	Predicted RBP	5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	DONSON	Q9NYP3	566 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	TRPM5	Q9NZQ8	1165 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	VPS54	Q9P1Q0	977 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	TJP2	Q9UDY2	1190 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	ITGB1BP2	Q9UKP3	347 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	DSE	Q9UL01	958 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	UBQLN1	Q9UMX0	589 aa	Known RBP	5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	SVIL	O95425	2214 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	CSMD2	Q7Z408	3487 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	HIVEP1	P15822	2718 aa		5.75	□□□□□ -1.49
SEC13-219	ENST00000492602	CELSR1	Q9NYQ6	3014 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602		A0A1B0GVM2	712 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	FAM47DP	A6NHR8	397 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	NEDD8-MDP1	E9PL57	170 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	CYB561D2	O14569	222 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	SDC3	O75056	442 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	LYPLA2	O95372	231 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	DDAH2	O95865	285 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	CYP11A1	P05108	521 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms