RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 CCDC130P13994 396 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 DPP6P42658 865 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 DLG4P78352 724 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 STK4Q13043 487 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 SGSM1Q2NKQ1 1148 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 ANO4Q32M45 955 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 ZACNQ401N2 412 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 SLC23A3Q6PIS1 610 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 ARMCX6Q7L4S7 300 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 SLC2A14Q8TDB8 520 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 NUSAP1Q9BXS6 441 aaKnown RBP21.04■□□□□ 0.96
NELFE-212ENST00000492539 FBXO44Q9H4M3 255 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 HMGXB4Q9UGU5 601 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 STARD13Q9Y3M8 1113 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 PCDH15Q96QU1 1955 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 PCNX2A6NKB5 2137 aa21.04■□□□□ 0.96
NELFE-212ENST00000492539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.03■□□□□ 0.96
NELFE-212ENST00000492539 TLR5O60602 858 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 CLSTN1O94985 981 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 RPN1P04843 607 aaKnown RBP21.03■□□□□ 0.96
NELFE-212ENST00000492539 IRF1P10914 325 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 P4HA1P13674 534 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 GABRG2P18507 467 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 CMA1P23946 247 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 NDST1P52848 882 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 FOXC1Q12948 553 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 C10orf76Q5T2E6 689 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 LYSMD4Q5XG99 296 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 NUDT18Q6ZVK8 323 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 HTR3DQ70Z44 454 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 UNC93AQ86WB7 457 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 PGBD3Q8N328 593 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 TAF4BQ92750 862 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 IPO9Q96P70 1041 aaKnown RBP21.03■□□□□ 0.96
NELFE-212ENST00000492539 KLF16Q9BXK1 252 aaPredicted RBP21.03■□□□□ 0.96
NELFE-212ENST00000492539 NACA2Q9H009 215 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 KCTD10Q9H3F6 313 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 GDPD2Q9HCC8 539 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 TLR8Q9NR97 1041 aaKnown RBP21.03■□□□□ 0.96
NELFE-212ENST00000492539 PILRBQ9UKJ0 227 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 WDFY3Q8IZQ1 3526 aa21.03■□□□□ 0.96
NELFE-212ENST00000492539 C1QTNF9BB2RNN3 333 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 TRIM24O15164 1050 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 C1QTNF9P0C862 333 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 HOXB2P14652 356 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 ENGP17813 658 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 HOXD12P35452 270 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 ASPAP45381 313 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 MAP3K7CLP57077 242 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 ORC1Q13415 861 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 UAP1L1Q3KQV9 507 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 UNQ6494/PRO21346Q6UXR6 183 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 MIB1Q86YT6 1006 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 TMEM121BQ9BXQ6 578 aaPredicted RBP21.02■□□□□ 0.96
NELFE-212ENST00000492539 CD248Q9HCU0 757 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 CYLDQ9NQC7 956 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 MARK1Q9P0L2 795 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 SERTAD1Q9UHV2 236 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 ZZEF1O43149 2961 aa21.02■□□□□ 0.96
NELFE-212ENST00000492539 ATXN2Q99700 1313 aaKnown RBP21.02■□□□□ 0.95
NELFE-212ENST00000492539 A0A1W2PQ27 194 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 A0A1W2PQ64 194 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 A0A1W2PQD8 194 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 A0A1W2PQF6 199 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 PDXKO00764 312 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 AP5Z1O43299 807 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 ACTN4O43707 911 aaKnown RBP21.01■□□□□ 0.95
NELFE-212ENST00000492539 CACNG3O60359 315 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 TBX18O95935 607 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 ASS1P00966 412 aaKnown RBP21.01■□□□□ 0.95
NELFE-212ENST00000492539 SLFN14P0C7P3 912 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 ITPKAP23677 461 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 NTSR1P30989 418 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 GRAMD4Q6IC98 578 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 SV2AQ7L0J3 742 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 GPRIN1Q7Z2K8 1008 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 CEP57L1Q8IYX8 460 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 C12orf29Q8N999 325 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 DEFB124Q8NES8 71 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 TMC2Q8TDI7 906 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 FAM49BQ9NUQ9 324 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 OSER1Q9NX31 292 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 CALCOCO1Q9P1Z2 691 aa21.01■□□□□ 0.95
NELFE-212ENST00000492539 AKAP13Q12802 2813 aa21■□□□□ 0.95
NELFE-212ENST00000492539 FAM237AA0A1B0GTK4 181 aa21■□□□□ 0.95
NELFE-212ENST00000492539 HHLA1C9JL84 531 aa21■□□□□ 0.95
NELFE-212ENST00000492539 IKBKBO14920 756 aa21■□□□□ 0.95
NELFE-212ENST00000492539 NR3C1P04150 777 aa21■□□□□ 0.95
NELFE-212ENST00000492539 FAM200BP0CF97 657 aa21■□□□□ 0.95
NELFE-212ENST00000492539 PFKFB1P16118 471 aa21■□□□□ 0.95
NELFE-212ENST00000492539 INCA1Q0VD86 236 aa21■□□□□ 0.95
NELFE-212ENST00000492539 KMT5BQ4FZB7 885 aa21■□□□□ 0.95
NELFE-212ENST00000492539 C1orf220Q5T0J3 134 aa21■□□□□ 0.95
NELFE-212ENST00000492539 EGFLAMQ63HQ2 1017 aa21■□□□□ 0.95
NELFE-212ENST00000492539 SPOPLQ6IQ16 392 aa21■□□□□ 0.95
NELFE-212ENST00000492539 SLC36A4Q6YBV0 504 aa21■□□□□ 0.95
NELFE-212ENST00000492539 CLEC20AQ6ZU45 233 aa21■□□□□ 0.95
NELFE-212ENST00000492539 PAGE5Q96GU1 130 aa21■□□□□ 0.95
NELFE-212ENST00000492539 XPO6Q96QU8 1125 aaKnown RBP21■□□□□ 0.95
NELFE-212ENST00000492539 HNRNPABQ99729 332 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms