RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	LNP1	A1A4G5	178 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	RHOBTB3	O94955	611 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	TRIM49	P0CI25	452 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	TRIM49C	P0CI26	452 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	KRT13	P13646	458 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	PML	P29590	882 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	BYSL	Q13895	437 aa	Known RBP	16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	NFIL3	Q16649	462 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	DAB2IP	Q5VWQ8	1189 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	CLEC20A	Q6ZU45	233 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	TMEM25	Q86YD3	366 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	PGBD3	Q8N328	593 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	ZNF513	Q8N8E2	541 aa	Predicted RBP	16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	CCDC150	Q8NCX0	1101 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	HMGB4	Q8WW32	186 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	RLN3	Q8WXF3	142 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	WBP2	Q969T9	261 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	JAKMIP2	Q96AA8	810 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	HNRNPAB	Q99729	332 aa	Known RBP	16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	NT5C1A	Q9BXI3	368 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	NIF3L1	Q9GZT8	377 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	PNPLA8	Q9NP80	782 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	ZDHHC4	Q9NPG8	344 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	CYLD	Q9NQC7	956 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	16.19	■□□□□ 0.18	2e-6	■■■■■ 165.1
MRPL55-231	ENST00000492170	SCML2	Q9UQR0	700 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	PCDHA5	Q9Y5H7	936 aa		16.19	■□□□□ 0.18
MRPL55-231	ENST00000492170	C4orf47	A7E2U8	309 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	CYP26A1	O43174	497 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	MAP3K13	O43283	966 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	ADAM23	O75077	832 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	KCNK5	O95279	499 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	PRR29	P0C7W0	189 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	ACO1	P21399	889 aa	Known RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	RPL13	P26373	211 aa	Known RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	ATP5C1	P36542	298 aa	Known RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	ANP32A	P39687	249 aa	Known RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	GCLM	P48507	274 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	PGF	P49763	221 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	NDUFA8	P51970	172 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	ENPEP	Q07075	957 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	ST3GAL2	Q16842	350 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	C10orf76	Q5T2E6	689 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	GRAMD4	Q6IC98	578 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	HTR3D	Q70Z44	454 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	GPRIN1	Q7Z2K8	1008 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	FAM186B	Q8IYM0	893 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	PIGK	Q92643	395 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	CYFIP2	Q96F07	1278 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	XPO6	Q96QU8	1125 aa	Known RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	TWNK	Q96RR1	684 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	KLF16	Q9BXK1	252 aa	Predicted RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	SCAND2P	Q9GZW5	306 aa	Predicted RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	APOBEC3G	Q9HC16	384 aa	Known RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	TMEM9B	Q9NQ34	198 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	DNAJC17	Q9NVM6	304 aa	Known RBP	16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	MYH10	P35580	1976 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	THADA	Q6YHU6	1953 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	CHD8	Q9HCK8	2581 aa		16.18	■□□□□ 0.18
MRPL55-231	ENST00000492170	FAM237A	A0A1B0GTK4	181 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	TBX18	O95935	607 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	HOXB2	P14652	356 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	CD58	P19256	250 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	PSMC2	P35998	433 aa	Known RBP	16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	NOVA1	P51513	510 aa	Known RBP	16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	PPP3CA	Q08209	521 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	DPYD	Q12882	1025 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	PSAPL1	Q6NUJ1	521 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	KLHDC10	Q6PID8	442 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	TADA2B	Q86TJ2	420 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	GUF1	Q8N442	669 aa	Known RBP	16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	TAS1R2	Q8TE23	839 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	BBS2	Q9BXC9	721 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	MMRN2	Q9H8L6	949 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	WDR35	Q9P2L0	1181 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	MAPK8IP1	Q9UQF2	711 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	NUP205	Q92621	2012 aa		16.17	■□□□□ 0.18
MRPL55-231	ENST00000492170	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170		A0A1W2PQH9	124 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	PATE3	B3GLJ2	98 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	HHLA1	C9JL84	531 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	NEDD8-MDP1	E9PL57	170 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	ZBTB24	O43167	697 aa	Predicted RBP	16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	CACNG3	O60359	315 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	CILP	O75339	1184 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	RARG	P13631	454 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	TYR	P14679	529 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	DPP6	P42658	865 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	SHC2	P98077	582 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	MAP7D1	Q3KQU3	841 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	SPDYC	Q5MJ68	293 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	ARMCX6	Q7L4S7	300 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	TMEFF1	Q8IYR6	380 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	NMUR1	Q9HB89	426 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	TMEM8A	Q9HCN3	771 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	OSER1	Q9NX31	292 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	MARK1	Q9P0L2	795 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	EVL	Q9UI08	416 aa	Predicted RBP	16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	DNMT3L	Q9UJW3	386 aa		16.16	■□□□□ 0.18
MRPL55-231	ENST00000492170	STARD13	Q9Y3M8	1113 aa		16.16	■□□□□ 0.18

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms