RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TISP43B9A030 160 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 GFRA2O00451 464 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 TRAK2O60296 914 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 LDOC1O95751 146 aaPredicted RBP14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 ANXA13P27216 316 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 OXTRP30559 389 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 POLR2BP30876 1174 aaKnown RBP14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 PNPLA4P41247 253 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 GRIA4P48058 902 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 PPP3CCP48454 512 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 ACADVLP49748 655 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 IFRD2Q12894 506 aaPredicted RBP14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 TEAD4Q15561 434 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 INAVAQ3KP66 663 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 VSTM1Q6UX27 236 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 C4orf50Q6ZRC1 276 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 TMPRSS6Q8IU80 811 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 ADGRF2Q8IZF7 708 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 C4orf32Q8N8J7 132 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 ZNF248Q8NDW4 579 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 NUP58Q9BVL2 599 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 C6orf106Q9H6K1 298 aaPredicted RBP14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 CRTAC1Q9NQ79 661 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 AGAP1Q9UPQ3 857 aa14.57□□□□□ -0.08
EXOSC3-207ENST00000490516 ANKRD63C9JTQ0 380 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 H0YCG3 227 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 TULP1O00294 542 aaPredicted RBP14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 GABRDO14764 452 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 COCHO43405 550 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 CACNG3O60359 315 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 IGLV3-19P01714 112 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 ITGB3P05106 788 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 C1SP09871 688 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 IRF1P10914 325 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 TYRP14679 529 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 PCSK1P29120 753 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 CTSKP43235 329 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 UCNP55089 124 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 NOP14P78316 857 aaKnown RBP14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 STARD3Q14849 445 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 PRAMEF14Q5SWL7 426 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 IGSF22Q8N9C0 903 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 SIPA1Q96FS4 1042 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 FAM84AQ96KN4 292 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 SYT15Q9BQS2 421 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 BBS2Q9BXC9 721 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 SNX9Q9Y5X1 595 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 MYO9AB2RTY4 2548 aa14.56□□□□□ -0.08
EXOSC3-207ENST00000490516 F8VP50 259 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 PAPSS1O43252 624 aaPredicted RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 CDK4P11802 303 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 GLDCP23378 1020 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 LMO2P25791 158 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 LHX1P48742 406 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 WNT7BP56706 349 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 PCBP4P57723 403 aaKnown RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 GUCY1B3Q02153 619 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 CYP27A1Q02318 531 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 ORC2Q13416 577 aaPredicted RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 TRIM29Q14134 588 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 ZRSR1Q15695 479 aaKnown RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 TTC38Q5R3I4 469 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 KRT79Q5XKE5 535 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 ADALQ6DHV7 355 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 TPGS1Q6ZTW0 290 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 NECAB1Q8N987 351 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 PRCCQ92733 491 aaPredicted RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 CEP295NLQ96MC4 621 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 XPO6Q96QU8 1125 aaKnown RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 EHD2Q9NZN4 543 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 LARSQ9P2J5 1176 aaKnown RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 FLNCQ14315 2725 aa14.55□□□□□ -0.08
EXOSC3-207ENST00000490516 A0A1B0GTQ1 180 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 K7ENM7 598 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 CISD3P0C7P0 127 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 ACADMP11310 421 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 PLCG1P19174 1290 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 ACSL1P33121 698 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 DGKGP49619 791 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 COPAP53621 1224 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 CACNA2D1P54289 1103 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 VAC14Q08AM6 782 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 NFATC3Q12968 1075 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 SOWAHAQ2M3V2 549 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 TDRD10Q5VZ19 366 aaKnown RBP14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 KIAA1614Q5VZ46 1190 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 CRELD2Q6UXH1 353 aaPredicted RBP14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 C1orf127Q8N9H9 656 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 TSC1Q92574 1164 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 KCNN1Q92952 543 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 HIC2Q96JB3 615 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 SLITRK1Q96PX8 696 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 PLIN2Q99541 437 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 TM6SF1Q9BZW5 370 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 OSGEPQ9NPF4 335 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 TMEM30AQ9NV96 361 aa14.54□□□□□ -0.08
EXOSC3-207ENST00000490516 ANKMY1Q9P2S6 941 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms