RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 GIPC2Q8TF65 315 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 C2orf15Q8WU43 125 aaKnown RBP16.48■□□□□ 0.23
PCCB-218ENST00000490504 SMARCD2Q92925 531 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 FAM124BQ9H5Z6 455 aaPredicted RBP16.48■□□□□ 0.23
PCCB-218ENST00000490504 DDX43Q9NXZ2 648 aaKnown RBP16.48■□□□□ 0.23
PCCB-218ENST00000490504 CTTNBP2NLQ9P2B4 639 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 PIEZO1Q92508 2521 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 CACNA1HO95180 2353 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 FAM170AA1A519 330 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 BUB1BO60566 1050 aaPredicted RBP16.48■□□□□ 0.23
PCCB-218ENST00000490504 MYBL1P10243 752 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 VIPR2P41587 438 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 STARD6P59095 220 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 TSPY1Q01534 308 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 CENPCQ03188 943 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 PEX26Q7Z412 305 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 ADGRF2Q8IZF7 708 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 TMEM86AQ8N2M4 240 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 DTWD2Q8NBA8 298 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 ZSCAN18Q8TBC5 510 aaPredicted RBP16.48■□□□□ 0.23
PCCB-218ENST00000490504 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 COG1Q8WTW3 980 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 ATOH1Q92858 354 aaPredicted RBP16.48■□□□□ 0.23
PCCB-218ENST00000490504 ACBD6Q9BR61 282 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 FOXQ1Q9C009 403 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 SLITRK6Q9H5Y7 841 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 UVRAGQ9P2Y5 699 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 PCDHB5Q9Y5E4 795 aa16.48■□□□□ 0.23
PCCB-218ENST00000490504 CES2O00748 559 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 GABRDO14764 452 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 DCNP07585 359 aaKnown RBP16.47■□□□□ 0.23
PCCB-218ENST00000490504 NSFP46459 744 aaKnown RBP16.47■□□□□ 0.23
PCCB-218ENST00000490504 RAP1GAPP47736 663 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 NOMO3P69849 1222 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 PFKPQ01813 784 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 MYO1EQ12965 1108 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 MLF2Q15773 248 aaPredicted RBP16.47■□□□□ 0.23
PCCB-218ENST00000490504 NAA35Q5VZE5 725 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 C11orf63Q6NUN7 778 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 ZNF572Q7Z3I7 529 aaPredicted RBP16.47■□□□□ 0.23
PCCB-218ENST00000490504 LIMS2Q7Z4I7 341 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 ITIH5Q86UX2 942 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 CREG2Q8IUH2 290 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 CCDC105Q8IYK2 499 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 ZNF606Q8WXB4 792 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 CYFIP2Q96F07 1278 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 MMS19Q96T76 1030 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 PSMB7Q99436 277 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 PKMYT1Q99640 499 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 TRPV4Q9HBA0 871 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 ABCB6Q9NP58 842 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 RNF14Q9UBS8 474 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 AMFRQ9UKV5 643 aa16.47■□□□□ 0.23
PCCB-218ENST00000490504 ATMINO43313 823 aaPredicted RBP16.46■□□□□ 0.23
PCCB-218ENST00000490504 LSM8O95777 96 aaKnown RBP16.46■□□□□ 0.23
PCCB-218ENST00000490504 PAEPP09466 180 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 GABRR2P28476 465 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 CXCR5P32302 372 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 GPR15P49685 360 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 TNNC1P63316 161 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 VEPH1Q14D04 833 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 INTS6LQ5JSJ4 861 aaKnown RBP16.46■□□□□ 0.23
PCCB-218ENST00000490504 CCDC181Q5TID7 509 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 VITQ6UXI7 678 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 NT5DC3Q86UY8 548 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 MCOLN2Q8IZK6 566 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 TTC39CQ8N584 583 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 GPR161Q8N6U8 529 aaKnown RBP16.46■□□□□ 0.23
PCCB-218ENST00000490504 KBTBD7Q8WVZ9 684 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 CPA5Q8WXQ8 436 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 RSPRY1Q96DX4 576 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 SHDQ96IW2 340 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 SDCBP2Q9H190 292 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 GOLPH3Q9H4A6 298 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 IL21Q9HBE4 155 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 CNOT8Q9UFF9 292 aaKnown RBP16.46■□□□□ 0.23
PCCB-218ENST00000490504 PACSIN2Q9UNF0 486 aaPredicted RBP16.46■□□□□ 0.23
PCCB-218ENST00000490504 SIT1Q9Y3P8 196 aa16.46■□□□□ 0.23
PCCB-218ENST00000490504 TSC2P49815 1807 aa16.46■□□□□ 0.22
PCCB-218ENST00000490504 PDE2AO00408 941 aaPredicted RBP16.45■□□□□ 0.22
PCCB-218ENST00000490504 CD72P21854 359 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 BRD2P25440 801 aaKnown RBP16.45■□□□□ 0.22
PCCB-218ENST00000490504 LMO2P25791 158 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 LHX1P48742 406 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 PRKCQQ04759 706 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 NFE2Q16621 373 aaPredicted RBP16.45■□□□□ 0.22
PCCB-218ENST00000490504 ZNF394Q53GI3 561 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 SDHAF4Q5VUM1 108 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 MON1BQ7L1V2 547 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 DPH6Q7L8W6 267 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 PASD1Q8IV76 773 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 STKLD1Q8NE28 680 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 ZNF564Q8TBZ8 553 aaPredicted RBP16.45■□□□□ 0.22
PCCB-218ENST00000490504 SPATA18Q8TC71 538 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 VCPIP1Q96JH7 1222 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 PBKQ96KB5 322 aa16.45■□□□□ 0.22
PCCB-218ENST00000490504 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms