RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ZDHHC11BP0C7U3 371 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 FAM200BP0CF97 657 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 EPB41P11171 864 aaKnown RBP10.94□□□□□ -0.66
TTC28-207ENST00000490475 PPP1R2P41236 205 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 PIK3CAP42336 1068 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 ZXDBP98169 803 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 CREB5Q02930 508 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 PAK1Q13153 545 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 C2orf27AQ580R0 203 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 STPG1Q5TH74 334 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 DAB2IPQ5VWQ8 1189 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 PMS2CLQ68D20 193 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 KLHDC10Q6PID8 442 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 RHBDF2Q6PJF5 856 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 TAS1R2Q8TE23 839 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 XPO6Q96QU8 1125 aaKnown RBP10.94□□□□□ -0.66
TTC28-207ENST00000490475 MED15Q96RN5 788 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 SRRTQ9BXP5 876 aaKnown RBP10.94□□□□□ -0.66
TTC28-207ENST00000490475 SMYD3Q9H7B4 428 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 KRT82Q9NSB4 513 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 DEC1Q9P2X7 70 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 MYOFQ9NZM1 2061 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 ABCA7Q8IZY2 2146 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 BICDL2A1A5D9 508 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 TBC1D3BA6NDS4 549 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 KHNYNO15037 678 aaKnown RBP10.93□□□□□ -0.66
TTC28-207ENST00000490475 SLC16A3O15427 465 aaKnown RBP10.93□□□□□ -0.66
TTC28-207ENST00000490475 GDF9O60383 454 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 TLR5O60602 858 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 HLA-DRAP01903 254 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 GTF2H1P32780 548 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 HOXD12P35452 270 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 ATP5C1P36542 298 aaKnown RBP10.93□□□□□ -0.66
TTC28-207ENST00000490475 NDST1P52848 882 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 CDH8P55286 799 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 SEC13P55735 322 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 SLC8A3P57103 927 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 INCA1Q0VD86 236 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 SF3A2Q15428 464 aaKnown RBP10.93□□□□□ -0.66
TTC28-207ENST00000490475 LY6G5CQ5SRR4 150 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 TCERG1LQ5VWI1 586 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 RNF43Q68DV7 783 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 SPOPLQ6IQ16 392 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 SDE2Q6IQ49 451 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 ANO7Q6IWH7 933 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 SCARA5Q6ZMJ2 495 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 HTR3DQ70Z44 454 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 LPCAT2Q7L5N7 544 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 CYP2U1Q7Z449 544 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 RABEPKQ7Z6M1 372 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 ACOT1Q86TX2 421 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 FUKQ8N0W3 1084 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 ZNF276Q8N554 614 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 MLKLQ8NB16 471 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 EZH1Q92800 747 aaPredicted RBP10.93□□□□□ -0.66
TTC28-207ENST00000490475 SEMA4DQ92854 862 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 CEP63Q96MT8 703 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 KCNK16Q96T55 309 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 HNRNPABQ99729 332 aaKnown RBP10.93□□□□□ -0.66
TTC28-207ENST00000490475 NT5C1AQ9BXI3 368 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 CYLDQ9NQC7 956 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 SPHK2Q9NRA0 654 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 WDR35Q9P2L0 1181 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 ARMCX3Q9UH62 379 aaPredicted RBP10.93□□□□□ -0.66
TTC28-207ENST00000490475 CHORDC1Q9UHD1 332 aaPredicted RBP10.93□□□□□ -0.66
TTC28-207ENST00000490475 SCML2Q9UQR0 700 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 ZNF510Q9Y2H8 683 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 NME7Q9Y5B8 376 aa10.93□□□□□ -0.66
TTC28-207ENST00000490475 PLXND1Q9Y4D7 1925 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 MAP3K13O43283 966 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 KLF8O95600 359 aaPredicted RBP10.92□□□□□ -0.66
TTC28-207ENST00000490475 CACNA2D1P54289 1103 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 LMAN2Q12907 356 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 GAB4Q2WGN9 574 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 DPCR1Q3MIW9 517 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 CCDC40Q4G0X9 1142 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 DCAF17Q5H9S7 520 aaPredicted RBP10.92□□□□□ -0.66
TTC28-207ENST00000490475 NAIF1Q69YI7 327 aaPredicted RBP10.92□□□□□ -0.66
TTC28-207ENST00000490475 KRT39Q6A163 491 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 SLC36A4Q6YBV0 504 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 PAQR9Q6ZVX9 377 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 IL17RCQ8NAC3 791 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 TXNDC5Q8NBS9 432 aaKnown RBP10.92□□□□□ -0.66
TTC28-207ENST00000490475 SCAMP5Q8TAC9 235 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 SLC2A14Q8TDB8 520 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 UBE2Q2Q8WVN8 375 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 EDEM2Q9BV94 578 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 LSM14BQ9BX40 385 aaKnown RBP10.92□□□□□ -0.66
TTC28-207ENST00000490475 NIF3L1Q9GZT8 377 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 TMEM8AQ9HCN3 771 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 TMEM30AQ9NV96 361 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 GMIPQ9P107 970 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 BCCIPQ9P287 314 aaKnown RBP eCLIP10.92□□□□□ -0.66
TTC28-207ENST00000490475 RWDD2AQ9UIY3 292 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 ANGPTL2Q9UKU9 493 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 STARD13Q9Y3M8 1113 aa10.92□□□□□ -0.66
TTC28-207ENST00000490475 PI4KAP42356 2102 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 TM4SF5O14894 197 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 NPC1O15118 1278 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 AP5Z1O43299 807 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms