RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 LINC01465Q8N7H1 131 aa6.18□□□□□ -1.42
CCDC39-206ENST00000489868 SGCZQ96LD1 299 aa6.18□□□□□ -1.42
CCDC39-206ENST00000489868 CCDC138Q96M89 665 aa6.18□□□□□ -1.42
CCDC39-206ENST00000489868 PCSK5Q92824 1860 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 FAM234BA2RU67 622 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 A8MVJ9 347 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 CA12O43570 354 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 PECAM1P16284 738 aaPredicted RBP6.17□□□□□ -1.42
CCDC39-206ENST00000489868 COPB1P53618 953 aaKnown RBP6.17□□□□□ -1.42
CCDC39-206ENST00000489868 MRPS21P82921 87 aaKnown RBP6.17□□□□□ -1.42
CCDC39-206ENST00000489868 CLCA4Q14CN2 919 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 AWAT1Q58HT5 328 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 IZUMO3Q5VZ72 239 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 PTF1AQ7RTS3 328 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 CCDC146Q8IYE0 955 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 TXLNBQ8N3L3 684 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 PNLDC1Q8NA58 520 aaKnown RBP6.17□□□□□ -1.42
CCDC39-206ENST00000489868 SUN3Q8TAQ9 357 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 BRI3BPQ8WY22 251 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 C18orf8Q96DM3 657 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 PRR11Q96HE9 360 aaPredicted RBP6.17□□□□□ -1.42
CCDC39-206ENST00000489868 WDR24Q96S15 920 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 PCDHAC1Q9H158 963 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 MGAT4CQ9UBM8 478 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 NKX1-2Q9UD57 310 aaPredicted RBP6.17□□□□□ -1.42
CCDC39-206ENST00000489868 STEAP1Q9UHE8 339 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 ZMYND8Q9ULU4 1186 aaPredicted RBP6.17□□□□□ -1.42
CCDC39-206ENST00000489868 PCDHGB2Q9Y5G2 931 aa6.17□□□□□ -1.42
CCDC39-206ENST00000489868 PRRT4C9JH25 899 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 ADAMTS3O15072 1205 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 SNX2O60749 519 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 ATF7P17544 494 aaPredicted RBP6.16□□□□□ -1.42
CCDC39-206ENST00000489868 EIF4A1P60842 406 aaKnown RBP6.16□□□□□ -1.42
CCDC39-206ENST00000489868 GPS1Q13098 491 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 MPEG1Q2M385 716 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 SYCP2LQ5T4T6 812 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 XRRA1Q6P2D8 792 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 SRLQ86TD4 932 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 SRRM1Q8IYB3 904 aaKnown RBP6.16□□□□□ -1.42
CCDC39-206ENST00000489868 FSTL5Q8N475 847 aaPredicted RBP6.16□□□□□ -1.42
CCDC39-206ENST00000489868 SVIPQ8NHG7 77 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 EDC3Q96F86 508 aaKnown RBP6.16□□□□□ -1.42
CCDC39-206ENST00000489868 KAZALD1Q96I82 304 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 CERS4Q9HA82 394 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 ZBTB26Q9HCK0 441 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 TMEM8AQ9HCN3 771 aa6.16□□□□□ -1.42
CCDC39-206ENST00000489868 TMPRSS11DO60235 418 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 PRAMEF2O60811 474 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.42
CCDC39-206ENST00000489868 EEF1GP26641 437 aaKnown RBP6.15□□□□□ -1.42
CCDC39-206ENST00000489868 SERPINB3P29508 390 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 PBX1P40424 430 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 HSPA7P48741 367 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 TUBA4AP68366 448 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 ACOX1Q15067 660 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 AASDHQ4L235 1098 aaPredicted RBP6.15□□□□□ -1.42
CCDC39-206ENST00000489868 ARHGAP15Q53QZ3 475 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 FAXCQ5TGI0 409 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 MAFAQ8NHW3 353 aaPredicted RBP6.15□□□□□ -1.42
CCDC39-206ENST00000489868 VOPP1Q96AW1 172 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 SNX27Q96L92 541 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 MYD88Q99836 296 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 SH2D3AQ9BRG2 576 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 SNX15Q9NRS6 342 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 RGL1Q9NZL6 768 aa6.15□□□□□ -1.42
CCDC39-206ENST00000489868 WDR47O94967 919 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 MT-CO3P00414 261 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 MBPP02686 304 aaPredicted RBP6.14□□□□□ -1.43
CCDC39-206ENST00000489868 CELA2AP08217 269 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 TMEM225BP0DP42 221 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 CYP2A6P11509 494 aaPredicted RBP6.14□□□□□ -1.43
CCDC39-206ENST00000489868 CD19P15391 556 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 EGR1P18146 543 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 ABCB4P21439 1286 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 GPC5P78333 572 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 ST3GAL2Q16842 350 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 SLC5A9Q2M3M2 681 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.14□□□□□ -1.43
CCDC39-206ENST00000489868 CEP78Q5JTW2 689 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 TMTC4Q5T4D3 741 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 MRNIPQ6NTE8 343 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 SKAP1Q86WV1 359 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 GJA10Q969M2 543 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 SLC39A13Q96H72 371 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 ASB2Q96Q27 587 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 SAP30LQ9HAJ7 183 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 VPS45Q9NRW7 570 aa6.14□□□□□ -1.43
CCDC39-206ENST00000489868 OR2W5A6NFC9 320 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 POC1B-GALNT4F8VUJ3 575 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 COQ9O75208 318 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 ADRA1DP25100 572 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 MPGP29372 298 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 SLC5A2P31639 672 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 SRSF4Q08170 494 aaKnown RBP6.13□□□□□ -1.43
CCDC39-206ENST00000489868 SLC10A2Q12908 348 aaPredicted RBP6.13□□□□□ -1.43
CCDC39-206ENST00000489868 FAM187BQ17R55 369 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 USP17L6PQ6QN14 398 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 SERPINA13PQ6UXR4 307 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 GALNT4Q8N4A0 578 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 PNPLA1Q8N8W4 532 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms