RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 THEM5Q8N1Q8 247 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 TMEM86AQ8N2M4 240 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 TOP6BLQ8N6T0 577 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 GATA6Q92908 595 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 SMARCE1Q969G3 411 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 CCDC127Q96BQ5 260 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 HPDLQ96IR7 371 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 ACBD6Q9BR61 282 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 C1QTNF1Q9BXJ1 281 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 GTPBP4Q9BZE4 634 aaKnown RBP10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 CYP4F11Q9HBI6 524 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 HCFC1R1Q9NWW0 138 aa10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 HOOK1Q9UJC3 728 aaKnown RBP10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 ZFP37Q9Y6Q3 630 aaPredicted RBP10.67□□□□□ -0.7
AC055748.1-201ENST00000489836 C2orf16Q68DN1 1984 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 PRRG1O14668 218 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 IKBKBO14920 756 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 KINO60870 393 aaKnown RBP10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 AKAP3O75969 853 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 LRG1P02750 347 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 KRT19P08727 400 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 LAMP2P13473 410 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 PTPN2P17706 415 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 NR2F2P24468 414 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 EPHA5P54756 1037 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 DLG4P78352 724 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 BFSP1Q12934 665 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 MYO1EQ12965 1108 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 DUSP4Q13115 394 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 ADSSL1Q8N142 457 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 ATAD1Q8NBU5 361 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 FBF1Q8TES7 1133 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 C2orf15Q8WU43 125 aaKnown RBP10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 KBTBD7Q8WVZ9 684 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 ERCC4Q92889 916 aaPredicted RBP10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 PKMYT1Q99640 499 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 LRRC3Q9BY71 257 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 XYLT2Q9H1B5 865 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 CRIM1Q9NZV1 1036 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 CEP72Q9P209 647 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 MAN1B1Q9UKM7 699 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 YIPF1Q9Y548 306 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 SNX9Q9Y5X1 595 aa10.66□□□□□ -0.7
AC055748.1-201ENST00000489836 TSC2P49815 1807 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 ANHXE9PGG2 379 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 TACC1O75410 805 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 VNN1O95497 513 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 ASGR2P07307 311 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 RHOP08100 348 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 BMP6P22004 513 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 WARSP23381 471 aaKnown RBP10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 RPL13P26373 211 aaKnown RBP10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 ATICP31939 592 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 PSMC2P35998 433 aaKnown RBP10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 LHX1P48742 406 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 TWF1Q12792 350 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 ADAM9Q13443 819 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 MAP7Q14244 749 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 ZACNQ401N2 412 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 PABPC1LQ4VXU2 614 aaKnown RBP10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 TDRD10Q5VZ19 366 aaKnown RBP10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 ALG1LQ6GMV1 187 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 FAM171BQ6P995 826 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 BMP8AQ7Z5Y6 402 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 DCP1BQ8IZD4 617 aaKnown RBP10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 TTC9BQ8N6N2 239 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 GIMAP7Q8NHV1 300 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 ITFG1Q8TB96 612 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 SPPL2BQ8TCT7 592 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 PGLYRP2Q96PD5 576 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 LRFN3Q9BTN0 628 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 KCNK12Q9HB15 430 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 TMLHEQ9NVH6 421 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 DDX43Q9NXZ2 648 aaKnown RBP10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 IGSF9Q9P2J2 1179 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 CDH7Q9ULB5 785 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 SORCS3Q9UPU3 1222 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 FRMD4BQ9Y2L6 1034 aa10.65□□□□□ -0.7
AC055748.1-201ENST00000489836 NOTCH4Q99466 2003 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 PRR33A8MZF0 331 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 MOSPD3O75425 235 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 HAPLN1P10915 354 aaPredicted RBP10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 CCNE1P24864 410 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 PCSK1P29120 753 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 GSTT1P30711 240 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 GBP2P32456 591 aaPredicted RBP10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 CCR2P41597 374 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 TUFMP49411 452 aaKnown RBP10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 VAMP7P51809 220 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 PMS1P54277 932 aaKnown RBP10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 MYL6P60660 151 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 MYL7Q01449 175 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 ID3Q02535 119 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 PLD1Q13393 1074 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 MORC3Q14149 939 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 NFE2Q16621 373 aaPredicted RBP10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 SLC5A9Q2M3M2 681 aa10.64□□□□□ -0.71
AC055748.1-201ENST00000489836 SLC39A12Q504Y0 691 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms