RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 MGAT4CQ9UBM8 478 aa3.49□□□□□ -1.85
NEK2-204ENST00000489633 GABBR1Q9UBS5 961 aa3.49□□□□□ -1.85
NEK2-204ENST00000489633 ANKRD6Q9Y2G4 727 aa3.49□□□□□ -1.85
NEK2-204ENST00000489633 HS3ST3B1Q9Y662 390 aa3.49□□□□□ -1.85
NEK2-204ENST00000489633 CDY1Q9Y6F8 540 aa3.49□□□□□ -1.85
NEK2-204ENST00000489633 PTPRKQ15262 1439 aa3.49□□□□□ -1.85
NEK2-204ENST00000489633 CDK12Q9NYV4 1490 aaPredicted RBP3.48□□□□□ -1.85
NEK2-204ENST00000489633 FAM90A8PA6NJQ4 464 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 SMAD6O43541 496 aaKnown RBP3.48□□□□□ -1.85
NEK2-204ENST00000489633 RGS10O43665 173 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 UBXN7O94888 489 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 RASAL1O95294 804 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 FAM90A13PP0C7W8 464 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 FAM90A24PP0C7X0 464 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 MYBP10242 640 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 UQCRC1P31930 480 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 MTHFSP49914 203 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 NEK2P51955 445 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 ITGA8P53708 1063 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 RPS13P62277 151 aaKnown RBP3.48□□□□□ -1.85
NEK2-204ENST00000489633 SLC14A1Q13336 389 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 ERV3-1Q14264 604 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 C4orf46Q504U0 113 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 ANO7Q6IWH7 933 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 ZNF549Q6P9A3 640 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 DEF8Q6ZN54 512 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 DEFB132Q7Z7B7 95 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 ARFGAP1Q8N6T3 406 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 OR56A3Q8NH54 315 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 MAML1Q92585 1016 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 DPH1Q9BZG8 443 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 METTL14Q9HCE5 456 aaKnown RBP3.48□□□□□ -1.85
NEK2-204ENST00000489633 DNMT3BQ9UBC3 853 aaKnown RBP3.48□□□□□ -1.85
NEK2-204ENST00000489633 ASAP1Q9ULH1 1129 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 PROCRQ9UNN8 238 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.48□□□□□ -1.85
NEK2-204ENST00000489633 CFAP43Q8NDM7 1665 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 FER1L4A9Z1Z3 1794 aa3.48□□□□□ -1.85
NEK2-204ENST00000489633 BCORL1Q5H9F3 1711 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 GLI2P10070 1586 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 PRG4Q92954 1404 aaPredicted RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 RIMS1Q86UR5 1692 aaKnown RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 H7C4K7 107 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 M0R3H8 397 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 GTPBP1O00178 669 aaKnown RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 CLIC1O00299 241 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 CNOT3O75175 753 aaKnown RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 CT47B1P0C2W7 299 aaPredicted RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 U2AF1L5P0DN76 240 aaPredicted RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 HGFP14210 728 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 EPHA3P29320 983 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 TIRAPP58753 221 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 U2AF1Q01081 240 aaKnown RBP eCLIP3.47□□□□□ -1.85
NEK2-204ENST00000489633 DEUP1Q05D60 604 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 MTX1Q13505 466 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 RAB32Q13637 225 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 MFSD13AQ14CX5 517 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 DENND2CQ68D51 928 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 VSTM1Q6UX27 236 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 C16orf71Q8IYS4 520 aaPredicted RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 RBMXL3Q8N7X1 1067 aaKnown RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 ZFYVE19Q96K21 471 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 LRGUKQ96M69 825 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 TRMOQ9BU70 441 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 TRIM5Q9C035 493 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 ZBTB40Q9NUA8 1239 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 PNMA8BQ9ULN7 279 aaPredicted RBP3.47□□□□□ -1.85
NEK2-204ENST00000489633 LRRC7Q96NW7 1537 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 RAPGEF6Q8TEU7 1601 aa3.47□□□□□ -1.85
NEK2-204ENST00000489633 NCOA1Q15788 1441 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 UHRF1BP1Q6BDS2 1440 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 H3BML4 177 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 AGPSO00116 658 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 EXOC5O00471 708 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 CD3EAPO15446 510 aaKnown RBP3.46□□□□□ -1.86
NEK2-204ENST00000489633 TMPRSS11DO60235 418 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 TULP3O75386 442 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 MCM5P33992 734 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 CDKN2AP42771 156 aaKnown RBP3.46□□□□□ -1.86
NEK2-204ENST00000489633 CFHR3Q02985 330 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 SLC9C1Q4G0N8 1177 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 UBAP2Q5T6F2 1119 aaKnown RBP3.46□□□□□ -1.86
NEK2-204ENST00000489633 PELI3Q8N2H9 469 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 SPSB4Q96A44 273 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 EDC3Q96F86 508 aaKnown RBP3.46□□□□□ -1.86
NEK2-204ENST00000489633 PPP1R9BQ96SB3 815 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 ACO2Q99798 780 aaKnown RBP3.46□□□□□ -1.86
NEK2-204ENST00000489633 SCNM1Q9BWG6 230 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 ATP6V0A4Q9HBG4 840 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 XPNPEP3Q9NQH7 507 aa3.46□□□□□ -1.86
NEK2-204ENST00000489633 RGS12O14924 1447 aa3.45□□□□□ -1.86
NEK2-204ENST00000489633 ADCY10Q96PN6 1610 aa3.45□□□□□ -1.86
NEK2-204ENST00000489633 FYB1O15117 783 aa3.45□□□□□ -1.86
NEK2-204ENST00000489633 TBX3O15119 743 aa3.45□□□□□ -1.86
NEK2-204ENST00000489633 PHGDHO43175 533 aaKnown RBP3.45□□□□□ -1.86
NEK2-204ENST00000489633 RRP9O43818 475 aaKnown RBP3.45□□□□□ -1.86
NEK2-204ENST00000489633 ALDH1L1O75891 902 aa3.45□□□□□ -1.86
NEK2-204ENST00000489633 EN2P19622 333 aaPredicted RBP3.45□□□□□ -1.86
NEK2-204ENST00000489633 TNFRSF1BP20333 461 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms