RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 DMAP1Q9NPF5 467 aaPredicted RBP17.97■□□□□ 0.47
TOP3B-217ENST00000489581 DNAJC17Q9NVM6 304 aaKnown RBP17.97■□□□□ 0.47
TOP3B-217ENST00000489581 CYP8B1Q9UNU6 501 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 MTMR6Q9Y217 621 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 NEDD8-MDP1E9PL57 170 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 ZBTB24O43167 697 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-217ENST00000489581 NDUFV2P19404 249 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 CASP1P29466 404 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 NASPP49321 788 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-217ENST00000489581 BIRC3Q13489 604 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 ZNF699Q32M78 642 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 GRAMD4Q6IC98 578 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 TPGS1Q6ZTW0 290 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 ACOT1Q86TX2 421 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 CHPFQ8IZ52 775 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 CHCHD4Q8N4Q1 142 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 LINC00301Q8NCQ3 95 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 ZMIZ2Q8NF64 920 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 PLEKHO2Q8TD55 490 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 IPO4Q8TEX9 1081 aaKnown RBP17.96■□□□□ 0.47
TOP3B-217ENST00000489581 SMARCD1Q96GM5 515 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 TNIP3Q96KP6 325 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 SMOQ99835 787 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 SDCBP2Q9H190 292 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 CUEDC2Q9H467 287 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 KRT82Q9NSB4 513 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 STARD13Q9Y3M8 1113 aa17.96■□□□□ 0.47
TOP3B-217ENST00000489581 FAM92AA1XBS5 289 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 ARHGAP33O14559 1287 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 SPTLC2O15270 562 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 TLR5O60602 858 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 BEST1O76090 585 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 TBX18O95935 607 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 CD59P13987 128 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 RDXP35241 583 aaKnown RBP17.95■□□□□ 0.46
TOP3B-217ENST00000489581 RING1Q06587 406 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 ZNF667Q5HYK9 610 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 SDE2Q6IQ49 451 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 HTR3DQ70Z44 454 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 RABEPKQ7Z6M1 372 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 FUKQ8N0W3 1084 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 TRIML1Q8N9V2 468 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 HSPA12BQ96MM6 686 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 DUSP9Q99956 384 aaKnown RBP17.95■□□□□ 0.46
TOP3B-217ENST00000489581 C7orf25Q9BPX7 421 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 BBS2Q9BXC9 721 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 KLF16Q9BXK1 252 aaPredicted RBP17.95■□□□□ 0.46
TOP3B-217ENST00000489581 SLC6A17Q9H1V8 727 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 VRTNQ9H8Y1 702 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 CD93Q9NPY3 652 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 COMMD8Q9NX08 183 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 TFIP11Q9UBB9 837 aaKnown RBP17.95■□□□□ 0.46
TOP3B-217ENST00000489581 UBE4BO95155 1302 aa17.95■□□□□ 0.46
TOP3B-217ENST00000489581 ANKRD11Q6UB99 2663 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-217ENST00000489581 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-217ENST00000489581 PRRT4C9JH25 899 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 GREM1O60565 184 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 EXOC3O60645 756 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 ZNF217O75362 1048 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 CCDC130P13994 396 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 TYRP14679 529 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 MAP3K7CLP57077 242 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 SNRPFP62306 86 aaKnown RBP17.94■□□□□ 0.46
TOP3B-217ENST00000489581 EHHADHQ08426 723 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 ORC1Q13415 861 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 CNNM4Q6P4Q7 775 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 TOGARAM2Q6ZUX3 1019 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 UNC13DQ70J99 1090 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 RGL4Q8IZJ4 473 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 IQUBQ8NA54 791 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 CAMK1GQ96NX5 476 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 XPO6Q96QU8 1125 aaKnown RBP17.94■□□□□ 0.46
TOP3B-217ENST00000489581 BLZF1Q9H2G9 400 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 ZSCAN16Q9H4T2 348 aaPredicted RBP17.94■□□□□ 0.46
TOP3B-217ENST00000489581 CD248Q9HCU0 757 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 SLC39A2Q9NP94 309 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 RAD54BQ9Y620 910 aa17.94■□□□□ 0.46
TOP3B-217ENST00000489581 DSPP15924 2871 aaKnown RBP17.93■□□□□ 0.46
TOP3B-217ENST00000489581 ACACAQ13085 2346 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 CABIN1Q9Y6J0 2220 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 H0Y626 953 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 CACNG3O60359 315 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 NDUFS2O75306 463 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 TRIM16O95361 564 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 SYPP08247 313 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 NCOA4Q13772 614 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 LRSAM1Q6UWE0 723 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 C12orf56Q8IXR9 622 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 SLC2A14Q8TDB8 520 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 PARD3BQ8TEW8 1205 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 BHMTQ93088 406 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 FBXO44Q9H4M3 255 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 TLR8Q9NR97 1041 aaKnown RBP17.93■□□□□ 0.46
TOP3B-217ENST00000489581 DNAAF2Q9NVR5 837 aaKnown RBP17.93■□□□□ 0.46
TOP3B-217ENST00000489581 CACNA2D2Q9NY47 1150 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 LHX6Q9UPM6 363 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 PLXNB3Q9ULL4 1909 aa17.93■□□□□ 0.46
TOP3B-217ENST00000489581 GOLGA4Q13439 2230 aaKnown RBP17.92■□□□□ 0.46
TOP3B-217ENST00000489581 A0A1W2PQD8 194 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms