RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SMARCD1Q96GM5 515 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 MED10Q9BTT4 135 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 NMUR1Q9HB89 426 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 ARHGEF4Q9NR80 690 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 IGSF5Q9NSI5 407 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 FAM49BQ9NUQ9 324 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 TMEM74BQ9NUR3 256 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 CFAP45Q9UL16 551 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 HPSEQ9Y251 543 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 PI4KAP42356 2102 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 ADH1CP00326 375 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 NR3C1P04150 777 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 APODP05090 189 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 IRF1P10914 325 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 PFKFB1P16118 471 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 GRIA2P42262 883 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 PTGER3P43115 390 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 MAP3K7CLP57077 242 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 IRX4P78413 519 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 BECN1Q14457 450 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 CLEC20AQ6ZU45 233 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 DDX42Q86XP3 938 aaKnown RBP eCLIP12.44□□□□□ -0.42
ACTN4-206ENST00000489451 WHAMMQ8TF30 809 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 TNIP3Q96KP6 325 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 KLF16Q9BXK1 252 aaPredicted RBP12.44□□□□□ -0.42
ACTN4-206ENST00000489451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.425e-7■■■■■ 39.4
ACTN4-206ENST00000489451 FAM13BQ9NYF5 915 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 TBC1D14Q9P2M4 693 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 ZDHHC9Q9Y397 364 aa12.44□□□□□ -0.42
ACTN4-206ENST00000489451 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 A0A1W2PQF6 199 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 PDXKO00764 312 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 MDM4O15151 490 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 CYP26A1O43174 497 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 TLR5O60602 858 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 TOP3BO95985 862 aaKnown RBP12.43□□□□□ -0.42
ACTN4-206ENST00000489451 HLA-DRAP01903 254 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 TNFRSF4P43489 277 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 AP3M2P53677 418 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 GAD2Q05329 585 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 PPP3CAQ08209 521 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 INCA1Q0VD86 236 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 HSF5Q4G112 596 aaPredicted RBP12.43□□□□□ -0.42
ACTN4-206ENST00000489451 ARMCX6Q7L4S7 300 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 CYP2U1Q7Z449 544 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 TTC30AQ86WT1 665 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 TMEFF1Q8IYR6 380 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 TERB1Q8NA31 727 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 CCDC26Q8TAB7 109 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 GOLGA5Q8TBA6 731 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 TMC2Q8TDI7 906 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 OTUB2Q96DC9 234 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 ACOX2Q99424 681 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
ACTN4-206ENST00000489451 CD93Q9NPY3 652 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 CYLDQ9NQC7 956 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 SPHK2Q9NRA0 654 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 EXOC1Q9NV70 894 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 COMMD8Q9NX08 183 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 SH3BP1Q9Y3L3 701 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 GON4LQ3T8J9 2241 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 AKAP13Q12802 2813 aa12.43□□□□□ -0.42
ACTN4-206ENST00000489451 ATP8B3O60423 1300 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 ATXN2Q99700 1313 aaKnown RBP12.42□□□□□ -0.42
ACTN4-206ENST00000489451 TCRBV21S2A2A0A5A6 115 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 PRRT4C9JH25 899 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 TRIM49P0CI25 452 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 TRIM49CP0CI26 452 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 GABRG2P18507 467 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 SPINK2P20155 84 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 DHPSP49366 369 aaPredicted RBP12.42□□□□□ -0.42
ACTN4-206ENST00000489451 NOVA1P51513 510 aaKnown RBP12.42□□□□□ -0.42
ACTN4-206ENST00000489451 SGSM1Q2NKQ1 1148 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 EOGTQ5NDL2 527 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 PEAR1Q5VY43 1037 aaPredicted RBP12.42□□□□□ -0.42
ACTN4-206ENST00000489451 EGFLAMQ63HQ2 1017 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 TOGARAM2Q6ZUX3 1019 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 HTR3DQ70Z44 454 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 C11orf74Q86VG3 221 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 UNC93AQ86WB7 457 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 CEP57L1Q8IYX8 460 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 TAS1R2Q8TE23 839 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 HMGB4Q8WW32 186 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 PIGKQ92643 395 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 HNRNPABQ99729 332 aaKnown RBP12.42□□□□□ -0.42
ACTN4-206ENST00000489451 FSCN3Q9NQT6 498 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 EVLQ9UI08 416 aaPredicted RBP12.42□□□□□ -0.42
ACTN4-206ENST00000489451 NUDT5Q9UKK9 219 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 TRAF3IP3Q9Y228 551 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
ACTN4-206ENST00000489451 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 TBC1D3BA6NDS4 549 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-206ENST00000489451 IKBKBO14920 756 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 KHNYNO15037 678 aaKnown RBP12.41□□□□□ -0.42
ACTN4-206ENST00000489451 CACNG3O60359 315 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 RPN1P04843 607 aaKnown RBP12.41□□□□□ -0.42
ACTN4-206ENST00000489451 CMA1P23946 247 aa12.41□□□□□ -0.42
ACTN4-206ENST00000489451 ADORA2BP29275 332 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms