RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 ADIGQ0VDE8 80 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 SCD5Q86SK9 330 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 MIB1Q86YT6 1006 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 SECISBP2LQ93073 1101 aaKnown RBP14.06□□□□□ -0.16
CCL28-202ENST00000489442 VPS16Q9H269 839 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 FAM86C1Q9NVL1 165 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 TAB2Q9NYJ8 693 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 CLIC5Q9NZA1 410 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 LSM7Q9UK45 103 aaKnown RBP14.06□□□□□ -0.16
CCL28-202ENST00000489442 DNAJC12Q9UKB3 198 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 CNTN6Q9UQ52 1028 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 ADH1CP00326 375 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 CHRNB1P11230 501 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 EFEMP1Q12805 493 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 FZD5Q13467 585 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 RAPGEF1Q13905 1077 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 PKDCCQ504Y2 493 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 FKBP15Q5T1M5 1219 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 CDKAL1Q5VV42 579 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 PM20D1Q6GTS8 502 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 PMF1Q6P1K2 205 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 KLHDC10Q6PID8 442 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 ADGRG2Q8IZP9 1017 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 RNF139Q8WU17 664 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 KCTD13Q8WZ19 329 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 GOLGA1Q92805 767 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 OTUB2Q96DC9 234 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 ZFRQ96KR1 1074 aaKnown RBP14.05□□□□□ -0.16
CCL28-202ENST00000489442 P2RY13Q9BPV8 354 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 ZSWIM1Q9BR11 485 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 KLF16Q9BXK1 252 aaPredicted RBP14.05□□□□□ -0.16
CCL28-202ENST00000489442 ST7Q9NRC1 585 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 RBM12Q9NTZ6 932 aaKnown RBP14.05□□□□□ -0.16
CCL28-202ENST00000489442 RASAL2Q9UJF2 1139 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 STRIP2Q9ULQ0 834 aa14.05□□□□□ -0.16
CCL28-202ENST00000489442 PIK3R2O00459 728 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 TRDMT1O14717 391 aaKnown RBP14.04□□□□□ -0.16
CCL28-202ENST00000489442 MDM4O15151 490 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 PTMSP20962 102 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 GALK1P51570 392 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 COG7P83436 770 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 CSTF1Q05048 431 aaKnown RBP14.04□□□□□ -0.16
CCL28-202ENST00000489442 PTK2Q05397 1052 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 MTAPQ13126 283 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 PPP2R5DQ14738 602 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 KRT31Q15323 416 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 DHCR24Q15392 516 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 ZNF687Q8N1G0 1237 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 ZNF276Q8N554 614 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 SLC35F5Q8WV83 523 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 ZNF606Q8WXB4 792 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 SHC3Q92529 594 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 NDRG1Q92597 394 aaKnown RBP14.04□□□□□ -0.16
CCL28-202ENST00000489442 HSFY1Q96LI6 401 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 IER2Q9BTL4 223 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 LSM14BQ9BX40 385 aaKnown RBP14.04□□□□□ -0.16
CCL28-202ENST00000489442 CHRDQ9H2X0 955 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 CNGB3Q9NQW8 809 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 OLA1Q9NTK5 396 aaKnown RBP14.04□□□□□ -0.16
CCL28-202ENST00000489442 VPS13AQ96RL7 3174 aa14.04□□□□□ -0.16
CCL28-202ENST00000489442 RIF1Q5UIP0 2472 aaKnown RBP14.03□□□□□ -0.16
CCL28-202ENST00000489442 BECN2A8MW95 431 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 FOXN3O00409 490 aaPredicted RBP14.03□□□□□ -0.16
CCL28-202ENST00000489442 CYP17A1P05093 508 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 HMBSP08397 361 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 DRD1P21728 446 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 KRT9P35527 623 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 ANO6Q4KMQ2 910 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 TMEM196Q5HYL7 178 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 HTR3DQ70Z44 454 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 BBS7Q8IWZ6 715 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 SYNPOQ8N3V7 929 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 CD101Q93033 1021 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 CHFRQ96EP1 664 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 PCMTD1Q96MG8 357 aaPredicted RBP14.03□□□□□ -0.16
CCL28-202ENST00000489442 MIS12Q9H081 205 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 SIX2Q9NPC8 291 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 ACP6Q9NPH0 428 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 ABCC13Q9NSE7 274 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 MARCH2Q9P0N8 246 aa14.03□□□□□ -0.16
CCL28-202ENST00000489442 YJEFN3A6XGL0 299 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 E7ENQ6 273 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 FBXO21O94952 628 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 SP9P0CG40 484 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 ADH5P11766 374 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 GPD2P43304 727 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 ACADSBP45954 432 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 CXCL12P48061 93 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 CCR3P51677 355 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 DAOAP59103 153 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 BPIFB4P59827 614 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 GAD2Q05329 585 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 KCNMA1Q12791 1236 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 CCINQ13939 588 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 DRAP1Q14919 205 aaPredicted RBP14.02□□□□□ -0.17
CCL28-202ENST00000489442 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 ANO4Q32M45 955 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 LY6G5CQ5SRR4 150 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms