RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 GPD1LQ8N335 351 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 PDZD8Q8NEN9 1154 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 SCAMP5Q8TAC9 235 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 BAHD1Q8TBE0 780 aaPredicted RBP17.17■□□□□ 0.34
USP48-210ENST00000489108 SCFD1Q8WVM8 642 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 OVCA2Q8WZ82 227 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 TOE1Q96GM8 510 aaKnown RBP17.17■□□□□ 0.34
USP48-210ENST00000489108 KCNK16Q96T55 309 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 GPR174Q9BXC1 333 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 ELOVL4Q9GZR5 314 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 WSB2Q9NYS7 404 aaPredicted RBP17.17■□□□□ 0.34
USP48-210ENST00000489108 FNDC3AQ9Y2H6 1198 aaKnown RBP17.17■□□□□ 0.34
USP48-210ENST00000489108 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
USP48-210ENST00000489108 A0A087WV48 116 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 FAM149AA5PLN7 773 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 NEDD8-MDP1E9PL57 170 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 RTN3O95197 1032 aaPredicted RBP17.16■□□□□ 0.34
USP48-210ENST00000489108 CST3P01034 146 aaPredicted RBP17.16■□□□□ 0.34
USP48-210ENST00000489108 ZNF883P0CG24 379 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 NCAM1P13591 858 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 TYRP14679 529 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 GAP43P17677 238 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 MATKP42679 507 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 CAMK2BQ13554 666 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 DUOXA2Q1HG44 320 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 HLA-BQ31612 363 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 SNX30Q5VWJ9 437 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 DBX2Q6ZNG2 339 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 USP49Q70CQ1 688 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 SCUBE3Q8IX30 993 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 DNAJC19Q96DA6 116 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 EPSTI1Q96J88 318 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 XPO6Q96QU8 1125 aaKnown RBP17.16■□□□□ 0.34
USP48-210ENST00000489108 DUSP9Q99956 384 aaKnown RBP17.16■□□□□ 0.34
USP48-210ENST00000489108 BBS2Q9BXC9 721 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 FGFBP2Q9BYJ0 223 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 TRIM9Q9C026 710 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 KNL1Q8NG31 2342 aa17.16■□□□□ 0.34
USP48-210ENST00000489108 BCAT2O15382 392 aaPredicted RBP17.15■□□□□ 0.34
USP48-210ENST00000489108 CACNG3O60359 315 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 TACC1O75410 805 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 PRPF6O94906 941 aaKnown RBP17.15■□□□□ 0.34
USP48-210ENST00000489108 CER1O95813 267 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 DCAF12L1Q5VU92 463 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 TPGS1Q6ZTW0 290 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 CDC6Q99741 560 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 ITM2CQ9NQX7 267 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 NFE2L3Q9Y4A8 694 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 CABIN1Q9Y6J0 2220 aa17.15■□□□□ 0.34
USP48-210ENST00000489108 ZNF233A6NK53 670 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 KCNJ18B7U540 433 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 H3BQV1 296 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 GFRA2O00451 464 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 GREM1O60565 184 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 CISD3P0C7P0 127 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 PGFP49763 221 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 FUT11Q495W5 492 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 HTR3DQ70Z44 454 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 TRAPPC11Q7Z392 1133 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 METTL3Q86U44 580 aaKnown RBP17.14■□□□□ 0.33
USP48-210ENST00000489108 CBWD2Q8IUF1 395 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 GALNT15Q8N3T1 639 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 CADM4Q8NFZ8 388 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 UBL7Q96S82 380 aaPredicted RBP17.14■□□□□ 0.33
USP48-210ENST00000489108 NACA2Q9H009 215 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 IL37Q9NZH6 218 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 GMIPQ9P107 970 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 USP36Q9P275 1121 aaKnown RBP17.14■□□□□ 0.33
USP48-210ENST00000489108 WDR35Q9P2L0 1181 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 BTBD3Q9Y2F9 522 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 STON1Q9Y6Q2 735 aa17.14■□□□□ 0.33
USP48-210ENST00000489108 METTL12A8MUP2 240 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 A8MXQ7 604 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 FLRT2O43155 660 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 FAM163BP0C2L3 166 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 ZDHHC11BP0C7U3 371 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 IDEP14735 1019 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 DGKGP49619 791 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 TUBP50607 506 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 SURF1Q15526 300 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 IL27RAQ6UWB1 636 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 B3GALNT2Q8NCR0 500 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 SLC39A7Q92504 469 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 MKRN2Q9H000 416 aaKnown RBP17.13■□□□□ 0.33
USP48-210ENST00000489108 OLFML3Q9NRN5 406 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 EIF2B4Q9UI10 523 aaKnown RBP17.13■□□□□ 0.33
USP48-210ENST00000489108 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.13■□□□□ 0.33
USP48-210ENST00000489108 PCDHGB2Q9Y5G2 931 aa17.13■□□□□ 0.33
USP48-210ENST00000489108 A0A1B0GVT2 93 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 C1QL1O75973 258 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 TBX18O95935 607 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 TPMTP51580 245 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 SLC5A3P53794 718 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
USP48-210ENST00000489108 WDR72Q3MJ13 1102 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 PAQR9Q6ZVX9 377 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 SV2BQ7L1I2 683 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 WDR49Q8IV35 697 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms