RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 NAALADL1Q9UQQ1 740 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 LRRD1A4D1F6 860 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 URODP06132 367 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 RHOXF2BP0C7M4 288 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 RALAP11233 206 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 DESP17661 470 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 NOS2P35228 1153 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SULT1E1P49888 294 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 DUSP4Q13115 394 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SLC25A52Q3SY17 297 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 MGAT5BQ3V5L5 792 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SCYL2Q6P3W7 929 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 ZDHHC14Q8IZN3 488 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SCML4Q8N228 414 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 MMGT1Q8N4V1 131 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 PHOSPHO2Q8TCD6 241 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 C2orf15Q8WU43 125 aaKnown RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 IRGQQ8WZA9 623 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 NT5C3BQ969T7 300 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SLITRK1Q96PX8 696 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 RHOXF2Q9BQY4 288 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 DDX56Q9NY93 547 aaKnown RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 LAMA3Q16787 3333 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 ERICH4A6NGS2 130 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 CAPN9O14815 690 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 PRPSAP2O60256 369 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 RARAP10276 462 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 HAPLN1P10915 354 aaPredicted RBP11.4□□□□□ -0.58
COL21A1-211ENST00000488912 NCAM1P13591 858 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 USP46P62068 366 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 MRPS25P82663 173 aaKnown RBP11.4□□□□□ -0.58
COL21A1-211ENST00000488912 COL13A1Q5TAT6 717 aaPredicted RBP11.4□□□□□ -0.58
COL21A1-211ENST00000488912 MFSD7Q6UXD7 560 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 RCOR2Q8IZ40 523 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 NUP93Q8N1F7 819 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 HSPH1Q92598 858 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 EDEM1Q92611 657 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 RBM41Q96IZ5 413 aaKnown RBP11.4□□□□□ -0.58
COL21A1-211ENST00000488912 KRT12Q99456 494 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 NPY6RQ99463 290 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 STAP1Q9ULZ2 295 aa11.4□□□□□ -0.58
COL21A1-211ENST00000488912 C3orf70A6NLC5 250 aaPredicted RBP11.4□□□□□ -0.59
COL21A1-211ENST00000488912 PGFP49763 221 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 SIX1Q15475 284 aaPredicted RBP11.4□□□□□ -0.59
COL21A1-211ENST00000488912 CLUL1Q15846 466 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 ODF2Q5BJF6 829 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 RASIP1Q5U651 963 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 BSPRYQ5W0U4 402 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 STRADAQ7RTN6 431 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 BNIPLQ7Z465 357 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 KLHL7Q8IXQ5 586 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 KLHL23Q8NBE8 558 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 ADAM32Q8TC27 787 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 OSBPL8Q9BZF1 889 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 DDX47Q9H0S4 455 aaKnown RBP11.4□□□□□ -0.59
COL21A1-211ENST00000488912 MTIF3Q9H2K0 278 aaKnown RBP11.4□□□□□ -0.59
COL21A1-211ENST00000488912 ANKZF1Q9H8Y5 726 aa11.4□□□□□ -0.59
COL21A1-211ENST00000488912 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.4□□□□□ -0.59
COL21A1-211ENST00000488912 SYNJ2BP-COX16A0A087WUM0 186 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 CCDC188H7C350 402 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 M0QYT0 321 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 FSCN2O14926 492 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 CD48P09326 243 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 KRT10P13645 584 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 ATF6P18850 670 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 TUBB4BP68371 445 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 KRT17Q04695 432 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 C9orf50Q5SZB4 431 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 SPOCD1Q6ZMY3 1216 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 DENND5BQ6ZUT9 1274 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 PRELID2Q8N945 189 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 CMASQ8NFW8 434 aaPredicted RBP11.39□□□□□ -0.59
COL21A1-211ENST00000488912 ZNF461Q8TAF7 563 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 SLC7A14Q8TBB6 771 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 LRRC1Q9BTT6 524 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 ZBP1Q9H171 429 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 RASSF4Q9H2L5 321 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 MRPL17Q9NRX2 175 aaKnown RBP11.39□□□□□ -0.59
COL21A1-211ENST00000488912 GPATCH2LQ9NWQ4 482 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 COX16Q9P0S2 106 aa11.39□□□□□ -0.59
COL21A1-211ENST00000488912 GOLGA6L10A0A0M3HER8 536 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 CCDC85CA6NKD9 419 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 ABLIM3O94929 683 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 SEC24AO95486 1093 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 KDELR1P24390 212 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 CDKN2BP42772 138 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 YWHAGP61981 247 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL21A1-211ENST00000488912 ADCY2Q08462 1091 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 NME3Q13232 169 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 KLF1Q13351 362 aaPredicted RBP11.38□□□□□ -0.59
COL21A1-211ENST00000488912 TFDP3Q5H9I0 405 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 KAZNQ674X7 775 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 C8orf74Q6P047 294 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 SCD5Q86SK9 330 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 FAM131BQ86XD5 332 aa11.38□□□□□ -0.59
COL21A1-211ENST00000488912 GPR161Q8N6U8 529 aaKnown RBP11.38□□□□□ -0.59
COL21A1-211ENST00000488912 CCDC185Q8N715 623 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms