RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 ASNSD1Q9NWL6 643 aa12.7□□□□□ -0.38
HDAC6-230ENST00000488543 RASAL2Q9UJF2 1139 aa12.7□□□□□ -0.38
HDAC6-230ENST00000488543 LRRD1A4D1F6 860 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 FOXO6A8MYZ6 492 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 XPO1O14980 1071 aaKnown RBP12.69□□□□□ -0.38
HDAC6-230ENST00000488543 KRT7P08729 469 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 PCK1P35558 622 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 RPL21P46778 160 aaKnown RBP12.69□□□□□ -0.38
HDAC6-230ENST00000488543 SLC11A1P49279 550 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 PPP2R2AP63151 447 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 CCNG2Q16589 344 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 HADHQ16836 314 aaKnown RBP12.69□□□□□ -0.38
HDAC6-230ENST00000488543 MDH1BQ5I0G3 518 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 LRIG3Q6UXM1 1119 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 B4GALNT4Q76KP1 1039 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 ZDHHC17Q8IUH5 632 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 BADQ92934 168 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 HSFY1Q96LI6 401 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 UROC1Q96N76 676 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 FAM118BQ9BPY3 351 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 SYT15Q9BQS2 421 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 DUSP16Q9BY84 665 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 PCSK1NQ9UHG2 260 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 MICAL3Q7RTP6 2002 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 M0QZQ0 153 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 DGKIO75912 1065 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 BEST1O76090 585 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 ECEL1O95672 775 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 FAM107AO95990 144 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 SCNN1AP37088 669 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 LHX1P48742 406 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 CCDC38Q502W7 563 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 KCNT1Q5JUK3 1230 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 KAZNQ674X7 775 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 SLC26A9Q7LBE3 791 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 TMEM199Q8N511 208 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 CMASQ8NFW8 434 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-230ENST00000488543 TOP1MTQ969P6 601 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 CFAP57Q96MR6 1250 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 GPR62Q9BZJ7 368 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 USP18Q9UMW8 372 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 NEU2Q9Y3R4 380 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 NLRC5Q86WI3 1866 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 PTPRDP23468 1912 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 CHD7Q9P2D1 2997 aa12.69□□□□□ -0.38
HDAC6-230ENST00000488543 TADA2AO75478 443 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 CAPN15O75808 1086 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 RNF8O76064 485 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 ALDH2P05091 517 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 CD48P09326 243 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 LCP1P13796 627 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 KDELR1P24390 212 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 CETN2P41208 172 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 ACADSBP45954 432 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 GTF2A1P52655 376 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-230ENST00000488543 SNX16P57768 344 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 PLCB3Q01970 1234 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 ADCY1Q08828 1119 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 BYSLQ13895 437 aaKnown RBP12.68□□□□□ -0.38
HDAC6-230ENST00000488543 TFDP3Q5H9I0 405 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 ZFYVE27Q5T4F4 411 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 PIGZQ86VD9 579 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 LRRTM3Q86VH5 581 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 C7orf61Q8IZ16 206 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 BCL7CQ8WUZ0 217 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-230ENST00000488543 SUSD3Q96L08 255 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 SELENOSQ9BQE4 189 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 C11orf84Q9BUA3 381 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-230ENST00000488543 RHOBTB2Q9BYZ6 727 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 GMNCA6NCL1 334 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 CYP11A1P05108 521 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 GALTP07902 379 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 ODC1P11926 461 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 NPR3P17342 541 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 TFE3P19532 575 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-230ENST00000488543 RFC2P35250 354 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 ARSEP51690 589 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 WDR5P61964 334 aaKnown RBP12.68□□□□□ -0.38
HDAC6-230ENST00000488543 IFI35P80217 286 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-230ENST00000488543 KRT17Q04695 432 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 CLEC20AQ6ZU45 233 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 TAS1R1Q7RTX1 841 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 CEP57Q86XR8 500 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 OR10T2Q8NGX3 314 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 TXLNGYQ9BZA5 131 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 TMLHEQ9NVH6 421 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 DNAJC17Q9NVM6 304 aaKnown RBP12.68□□□□□ -0.38
HDAC6-230ENST00000488543 CDH9Q9ULB4 789 aa12.68□□□□□ -0.38
HDAC6-230ENST00000488543 ABHD14A-ACY1A0A1B0GW23 586 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 TRAPPC3O43617 180 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 LIASO43766 372 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 ENDOD1O94919 500 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 TJP3O95049 919 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 OR4Q2P0C623 313 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 PTK6Q13882 451 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 OVOS1Q6IE37 1185 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 ZNF365Q70YC5 407 aa12.67□□□□□ -0.38
HDAC6-230ENST00000488543 ARCQ7LC44 396 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms