RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 RESP18Q5W5W9 173 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 GRAMD4Q6IC98 578 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 SDE2Q6IQ49 451 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 UNC93AQ86WB7 457 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 SLC9A9Q8IVB4 645 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 KDF1Q8NAX2 398 aaPredicted RBP16.04■□□□□ 0.16
NELFA-215ENST00000488452 SLC2A14Q8TDB8 520 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 TAF4BQ92750 862 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 XPO6Q96QU8 1125 aaKnown RBP16.04■□□□□ 0.16
NELFA-215ENST00000488452 KLF16Q9BXK1 252 aaPredicted RBP16.04■□□□□ 0.16
NELFA-215ENST00000488452 ADAM33Q9BZ11 813 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 DNAJC17Q9NVM6 304 aaKnown RBP16.04■□□□□ 0.16
NELFA-215ENST00000488452 WDR35Q9P2L0 1181 aa16.04■□□□□ 0.16
NELFA-215ENST00000488452 TNRC6BQ9UPQ9 1833 aaKnown RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 ATXN2Q99700 1313 aaKnown RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 A0A1W2PQF6 199 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 GREM1O60565 184 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 TBX18O95935 607 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 CFIP05156 583 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 ATP5C1P36542 298 aaKnown RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 WASP42768 502 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 ME1P48163 572 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 NDST1P52848 882 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 ATXN3P54252 364 aaPredicted RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 DLG4P78352 724 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 GOLGA8FQ08AF8 430 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 GOLGA8DPQ0D2H9 430 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 STK4Q13043 487 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 ORC1Q13415 861 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 FOXD4L6Q3SYB3 417 aaPredicted RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 FOXD4L5Q5VV16 416 aaPredicted RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 FOXD4L3Q6VB84 417 aaPredicted RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 MIB1Q86YT6 1006 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 CEP57L1Q8IYX8 460 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 DEFB119Q8N690 84 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 C12orf29Q8N999 325 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 FOXD4L4Q8WXT5 416 aaPredicted RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 SCNM1Q9BWG6 230 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 CALCOCO1Q9P1Z2 691 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 LSM7Q9UK45 103 aaKnown RBP16.03■□□□□ 0.16
NELFA-215ENST00000488452 ZMIZ1Q9ULJ6 1067 aa16.03■□□□□ 0.16
NELFA-215ENST00000488452 PLXND1Q9Y4D7 1925 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 TMEM8BA6NDV4 472 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 UPK3BL1B0FP48 263 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 UPK3BL2E5RIL1 263 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 NEDD8-MDP1E9PL57 170 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 KLRC4O43908 158 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 CACNG3O60359 315 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 ZNF217O75362 1048 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 SERPINF2P08697 491 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 PDIA4P13667 645 aaKnown RBP16.02■□□□□ 0.16
NELFA-215ENST00000488452 TYRP14679 529 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 TRIM21P19474 475 aaKnown RBP16.02■□□□□ 0.16
NELFA-215ENST00000488452 GFPT1Q06210 699 aaPredicted RBP16.02■□□□□ 0.16
NELFA-215ENST00000488452 ZNF33AQ06730 810 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 SEMA3BQ13214 749 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 ZACNQ401N2 412 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 EGFLAMQ63HQ2 1017 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 TPGS1Q6ZTW0 290 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 SV2AQ7L0J3 742 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 RABEPKQ7Z6M1 372 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 PIP4P1Q86T03 277 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 CHPFQ8IZ52 775 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 TMC2Q8TDI7 906 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 ACOX2Q99424 681 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 BBS2Q9BXC9 721 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 TMEM121BQ9BXQ6 578 aaPredicted RBP16.02■□□□□ 0.16
NELFA-215ENST00000488452 CYLDQ9NQC7 956 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 MARK1Q9P0L2 795 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 HMGXB4Q9UGU5 601 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 SERTAD1Q9UHV2 236 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 SCML2Q9UQR0 700 aa16.02■□□□□ 0.16
NELFA-215ENST00000488452 MYO18AQ92614 2054 aaKnown RBP16.01■□□□□ 0.15
NELFA-215ENST00000488452 PRRT4C9JH25 899 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 PDXKO00764 312 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 IKBKBO14920 756 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 ASS1P00966 412 aaKnown RBP16.01■□□□□ 0.15
NELFA-215ENST00000488452 SLFN14P0C7P3 912 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 FAM200BP0CF97 657 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 ZSCAN22P10073 491 aaPredicted RBP16.01■□□□□ 0.15
NELFA-215ENST00000488452 ADORA2BP29275 332 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 PLA2G4AP47712 749 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 ATL3Q6DD88 541 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 KIAA0895Q8NCT3 520 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 IPO4Q8TEX9 1081 aaKnown RBP16.01■□□□□ 0.15
NELFA-215ENST00000488452 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 HNRNPABQ99729 332 aaKnown RBP16.01■□□□□ 0.15
NELFA-215ENST00000488452 GTPBP2Q9BX10 602 aaKnown RBP16.01■□□□□ 0.15
NELFA-215ENST00000488452 KCTD10Q9H3F6 313 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 CAPN10Q9HC96 672 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.01■□□□□ 0.152e-7■■■■■ 93.2
NELFA-215ENST00000488452 FAM49BQ9NUQ9 324 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 EXOC1Q9NV70 894 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 OSER1Q9NX31 292 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 CFAP47Q6ZTR5 3102 aa16.01■□□□□ 0.15
NELFA-215ENST00000488452 IGHV1OR15-9A0A0B4J2B8 117 aa16■□□□□ 0.15
NELFA-215ENST00000488452 HHLA1C9JL84 531 aa16■□□□□ 0.15
NELFA-215ENST00000488452 NR3C1P04150 777 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms