RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 COL25A1Q9BXS0 654 aaPredicted RBP11.59□□□□□ -0.55
UBE4B-210ENST00000488228 NACA2Q9H009 215 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 TRPV4Q9HBA0 871 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 ZFP14Q9HCL3 533 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 AIPL1Q9NZN9 384 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 ZMYM5Q9UJ78 669 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 CPQQ9Y646 472 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 TECTAO75443 2155 aa11.59□□□□□ -0.55
UBE4B-210ENST00000488228 DPYSL4O14531 572 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 GRAP2O75791 330 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 LTFP02788 710 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 CCDC172P0C7W6 258 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 RALAP11233 206 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 PSEN1P49768 467 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 SLC7A9P82251 487 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 ZXDBP98169 803 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 CENPCQ03188 943 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 EFEMP1Q12805 493 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 TBX2Q13207 712 aaPredicted RBP11.58□□□□□ -0.56
UBE4B-210ENST00000488228 TAF5Q15542 800 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 ZNF77Q15935 545 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 BSPRYQ5W0U4 402 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 BTBD8Q5XKL5 378 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 OR6B2Q6IFH4 312 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 OLFML1Q6UWY5 402 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 TRIM72Q6ZMU5 477 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 RSRC2Q7L4I2 434 aaKnown RBP11.58□□□□□ -0.56
UBE4B-210ENST00000488228 TMEM110Q86TL2 294 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 ERICH1Q86X53 443 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 MIB1Q86YT6 1006 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 FMNL3Q8IVF7 1028 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 SCML4Q8N228 414 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 SH3RF2Q8TEC5 729 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 IRGQQ8WZA9 623 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 ZFYVE19Q96K21 471 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 DNAJC7Q99615 494 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.56
UBE4B-210ENST00000488228 KIF9Q9HAQ2 790 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 TDP1Q9NUW8 608 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 TAS2R14Q9NYV8 317 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 CLIC5Q9NZA1 410 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 IGSF9Q9P2J2 1179 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 ARHGAP26Q9UNA1 814 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 SORCS3Q9UPU3 1222 aa11.58□□□□□ -0.56
UBE4B-210ENST00000488228 SOBPA7XYQ1 873 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 TMCO5BA8MYB1 307 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 GOLGA8SH3BPF8 625 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 LEFTY2O00292 366 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 SART1O43290 800 aaKnown RBP11.57□□□□□ -0.56
UBE4B-210ENST00000488228 MSI1O43347 362 aaKnown RBP11.57□□□□□ -0.56
UBE4B-210ENST00000488228 TPM1P09493 284 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 UNGP13051 313 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-210ENST00000488228 PFKLP17858 780 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 WEE1P30291 646 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 NSFP46459 744 aaKnown RBP11.57□□□□□ -0.56
UBE4B-210ENST00000488228 ADKP55263 362 aaKnown RBP11.57□□□□□ -0.56
UBE4B-210ENST00000488228 TDGQ13569 410 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 ZNF268Q14587 947 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-210ENST00000488228 MTF1Q14872 753 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 PHLDB2Q86SQ0 1253 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 XYLT1Q86Y38 959 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 SLC44A3Q8N4M1 653 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 CELF5Q8N6W0 485 aaKnown RBP11.57□□□□□ -0.56
UBE4B-210ENST00000488228 MSANTD4Q8NCY6 345 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 SYN2Q92777 582 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-210ENST00000488228 GOLGA1Q92805 767 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 WBP2Q969T9 261 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 ASIC4Q96FT7 647 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 ABHD10Q9NUJ1 306 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 CFAP97Q9P2B7 532 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 ARHGAP20Q9P2F6 1191 aa11.57□□□□□ -0.56
UBE4B-210ENST00000488228 DDX3XO00571 662 aaKnown RBP eCLIP11.56□□□□□ -0.56
UBE4B-210ENST00000488228 ATMINO43313 823 aaPredicted RBP11.56□□□□□ -0.56
UBE4B-210ENST00000488228 DAB1O75553 588 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 GJB6O95452 261 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 ADCY5O95622 1261 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 SERPING1P05155 500 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 FYNP06241 537 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 HMBSP08397 361 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 PSMC3P17980 439 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 TNFAIP3P21580 790 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 MMP8P22894 467 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 GDI1P31150 447 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 GABRB2P47870 512 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 PITX1P78337 314 aaPredicted RBP11.56□□□□□ -0.56
UBE4B-210ENST00000488228 FCHO2Q0JRZ9 810 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 FAM102AQ5T9C2 384 aaPredicted RBP11.56□□□□□ -0.56
UBE4B-210ENST00000488228 WDR59Q6PJI9 974 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 TOGARAM2Q6ZUX3 1019 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 MON1BQ7L1V2 547 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 SLC26A9Q7LBE3 791 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 TAC4Q86UU9 113 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 PHF13Q86YI8 300 aaPredicted RBP11.56□□□□□ -0.56
UBE4B-210ENST00000488228 YAF2Q8IY57 180 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 BPIFB1Q8TDL5 484 aa11.56□□□□□ -0.56
UBE4B-210ENST00000488228 DQX1Q8TE96 717 aaKnown RBP11.56□□□□□ -0.56
UBE4B-210ENST00000488228 RNF139Q8WU17 664 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms