RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 TIAL1Q01085 375 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMC4-220ENST00000488017 KEAP1Q14145 624 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 NFATC4Q14934 902 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 TMPRSS12Q86WS5 348 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 TRMT61AQ96FX7 289 aaKnown RBP4.06□□□□□ -1.76
SMC4-220ENST00000488017 WDYHV1Q96HA8 205 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 MED30Q96HR3 178 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 MS4A7Q9GZW8 240 aaPredicted RBP4.06□□□□□ -1.76
SMC4-220ENST00000488017 CD93Q9NPY3 652 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 FZD4Q9ULV1 537 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 STXBP5LQ9Y2K9 1186 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 SPEF1Q9Y4P9 236 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 FER1L4A9Z1Z3 1794 aa4.06□□□□□ -1.76
SMC4-220ENST00000488017 F8W810 466 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 ZC3H11AO75152 810 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMC4-220ENST00000488017 HOXB2P14652 356 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 KCNJ4P48050 445 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 P2RX3P56373 397 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.05□□□□□ -1.76
SMC4-220ENST00000488017 NR2C2APQ86WQ0 139 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 PNPLA1Q8N8W4 532 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 SLC44A5Q8NCS7 719 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 DNAJB14Q8TBM8 379 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 KBTBD7Q8WVZ9 684 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 MVB12AQ96EY5 273 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 SCNM1Q9BWG6 230 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 TM2D2Q9BX73 214 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 NUAK2Q9H093 628 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 XPNPEP3Q9NQH7 507 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 CPA4Q9UI42 421 aa4.05□□□□□ -1.76
SMC4-220ENST00000488017 SPATA31A1Q5TZJ5 1347 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 TMEM272A0A1B0GTI8 110 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 A8MVJ9 347 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 NTN3O00634 580 aaPredicted RBP4.04□□□□□ -1.76
SMC4-220ENST00000488017 FYB1O15117 783 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 AKAP5P24588 427 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 ARFIP2P53365 341 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 GAS1P54826 345 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 SLC12A2P55011 1212 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 RPL36AP83881 106 aaKnown RBP4.04□□□□□ -1.76
SMC4-220ENST00000488017 PPATQ06203 517 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 LTBQ06643 244 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 TMEM240Q5SV17 173 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 ZNF783Q6ZMS7 281 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 WFIKKN2Q8TEU8 576 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 RAPGEF4Q8WZA2 1011 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 P2RX7Q99572 595 aaKnown RBP4.04□□□□□ -1.76
SMC4-220ENST00000488017 TRIM54Q9BYV2 358 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 GTPBP4Q9BZE4 634 aaKnown RBP4.04□□□□□ -1.76
SMC4-220ENST00000488017 MSRB1Q9NZV6 116 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 COG5Q9UP83 839 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 CDY1Q9Y6F8 540 aa4.04□□□□□ -1.76
SMC4-220ENST00000488017 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.03□□□□□ -1.76
SMC4-220ENST00000488017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.03□□□□□ -1.76
SMC4-220ENST00000488017 CD3EAPO15446 510 aaKnown RBP4.03□□□□□ -1.76
SMC4-220ENST00000488017 SRGAP2O75044 1071 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 KATNA1O75449 491 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 MCM5P33992 734 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 MLH1P40692 756 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 GPC5P78333 572 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 EGR4Q05215 589 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 CTBP1Q13363 440 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 FGL2Q14314 439 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 PTGR1Q14914 329 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 KPNB1Q14974 876 aaKnown RBP4.03□□□□□ -1.76
SMC4-220ENST00000488017 TRAPPC11Q7Z392 1133 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 CATIPQ7Z7H3 387 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 RBM23Q86U06 439 aaKnown RBP4.03□□□□□ -1.76
SMC4-220ENST00000488017 ZNF329Q86UD4 541 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 TMEM199Q8N511 208 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 NEUROG1Q92886 237 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 P2RY11Q96G91 374 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 SLITRK1Q96PX8 696 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 DPH1Q9BZG8 443 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 PAPOLBQ9NRJ5 636 aaKnown RBP4.03□□□□□ -1.76
SMC4-220ENST00000488017 SEMA5BQ9P283 1151 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 WNT16Q9UBV4 365 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 PAXBP1Q9Y5B6 917 aa4.03□□□□□ -1.76
SMC4-220ENST00000488017 EXOC5O00471 708 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 BTN3A1O00481 513 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 RRHO14718 337 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 TNFRSF13BO14836 293 aaPredicted RBP4.02□□□□□ -1.77
SMC4-220ENST00000488017 SNUPNO95149 360 aaKnown RBP4.02□□□□□ -1.77
SMC4-220ENST00000488017 CD19P15391 556 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 RPS6KB1P23443 525 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 RRP1P56182 461 aaKnown RBP4.02□□□□□ -1.77
SMC4-220ENST00000488017 INSCQ1MX18 579 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 GIMAP6Q6P9H5 292 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 SKAP1Q86WV1 359 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 OR6B3Q8NGW1 331 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 PLBD2Q8NHP8 589 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 FCRL5Q96RD9 977 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 SF3B5Q9BWJ5 86 aaKnown RBP4.02□□□□□ -1.77
SMC4-220ENST00000488017 RBM38Q9H0Z9 239 aaKnown RBP4.02□□□□□ -1.77
SMC4-220ENST00000488017 ARMT1Q9H993 441 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 FZD3Q9NPG1 666 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 ARL8BQ9NVJ2 186 aa4.02□□□□□ -1.77
SMC4-220ENST00000488017 NKX1-2Q9UD57 310 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms