RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 RSRC2Q7L4I2 434 aaKnown RBP11.55□□□□□ -0.56
HDLBP-242ENST00000488013 STRADAQ7RTN6 431 aa11.55□□□□□ -0.56
HDLBP-242ENST00000488013 GPRIN1Q7Z2K8 1008 aa11.55□□□□□ -0.56
HDLBP-242ENST00000488013 DAAM2Q86T65 1068 aa11.55□□□□□ -0.56
HDLBP-242ENST00000488013 RBM23Q86U06 439 aaKnown RBP11.55□□□□□ -0.56
HDLBP-242ENST00000488013 MRPS31Q92665 395 aaKnown RBP11.55□□□□□ -0.56
HDLBP-242ENST00000488013 DDX23Q9BUQ8 820 aaKnown RBP11.55□□□□□ -0.56
HDLBP-242ENST00000488013 METTL5Q9NRN9 209 aaKnown RBP11.55□□□□□ -0.56
HDLBP-242ENST00000488013 MAGED2Q9UNF1 606 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-242ENST00000488013 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
HDLBP-242ENST00000488013 JRKLQ9Y4A0 524 aa11.55□□□□□ -0.56
HDLBP-242ENST00000488013 ZNF840PA6NDX5 716 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 YJEFN3A6XGL0 299 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 MIF4GDA9UHW6 222 aaKnown RBP11.54□□□□□ -0.56
HDLBP-242ENST00000488013 E7ENQ6 273 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 PIK3R2O00459 728 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 SOAT2O75908 522 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 CSPG5O95196 566 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 SPATA31D3P0C874 917 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 NCAM1P13591 858 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 EPCAMP16422 314 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 AIF1P55008 147 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 RNASE9P60153 205 aaKnown RBP11.54□□□□□ -0.56
HDLBP-242ENST00000488013 GNG11P61952 73 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 RPL7AP62424 266 aaKnown RBP11.54□□□□□ -0.56
HDLBP-242ENST00000488013 ITIH3Q06033 890 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 IFRD2Q12894 506 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-242ENST00000488013 KCNC3Q14003 757 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 ARHGAP15Q53QZ3 475 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 DCAF6Q58WW2 860 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 TCEAL5Q5H9L2 206 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 HECTD3Q5T447 861 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 LRRC38Q5VT99 294 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 SDHAF4Q5VUM1 108 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 SPATA31D4Q6ZUB0 917 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 PDZD4Q76G19 769 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-242ENST00000488013 PEX26Q7Z412 305 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 SLFN11Q7Z7L1 901 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 DEFB106AQ8N104 65 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 RXFP2Q8WXD0 754 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 NT5C3BQ969T7 300 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 PGAP3Q96FM1 320 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-242ENST00000488013 SERPINB11Q96P15 392 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 NACA2Q9H009 215 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 TTYH1Q9H313 450 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-242ENST00000488013 PRDM12Q9H4Q4 367 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 PIDD1Q9HB75 910 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 OSGEPQ9NPF4 335 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
HDLBP-242ENST00000488013 GMIPQ9P107 970 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 TJP2Q9UDY2 1190 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 COG5Q9UP83 839 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 DUSP10Q9Y6W6 482 aa11.54□□□□□ -0.56
HDLBP-242ENST00000488013 CCDC195A0A1B0GUA6 201 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 A0A1W2PQH9 124 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 RFXAPO00287 272 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 BUB1O43683 1085 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 SPOPO43791 374 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 ZNF500O60304 480 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 BUB1BO60566 1050 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 KRT7P08729 469 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 RDXP35241 583 aaKnown RBP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 ATP5C1P36542 298 aaKnown RBP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 FLT3P36888 993 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 CDR1P51861 262 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 USP46P62068 366 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 ETF1P62495 437 aaKnown RBP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 MESDQ14696 234 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 GRIN2CQ14957 1233 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 ARL13BQ3SXY8 428 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 BOLA3Q53S33 107 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 ZNF569Q5MCW4 686 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 CES5AQ6NT32 575 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 MSANTD2Q6P1R3 559 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 POLNQ7Z5Q5 900 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 ADGRD2Q7Z7M1 963 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 SCD5Q86SK9 330 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 PHLDB2Q86SQ0 1253 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 PSTKQ8IV42 348 aaKnown RBP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 UBL4BQ8N7F7 174 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 LRRC57Q8N9N7 239 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 GPR152Q8TDT2 470 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 CENPIQ92674 756 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 KHSRPQ92945 711 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 TBCBQ99426 244 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 SMOC2Q9H3U7 446 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 CHORDC1Q9UHD1 332 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-242ENST00000488013 DNMT3LQ9UJW3 386 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 ALG6Q9Y672 507 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 MTCH2Q9Y6C9 303 aa11.53□□□□□ -0.56
HDLBP-242ENST00000488013 PTPRSQ13332 1948 aa11.52□□□□□ -0.56
HDLBP-242ENST00000488013 CCDC66A2RUB6 948 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 GRID2IPA4D2P6 1211 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 USP27XA6NNY8 438 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 CCL16O15467 120 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 PSTPIP1O43586 416 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 PRPSAP2O60256 369 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 TLR5O60602 858 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms