RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 ACP6Q9NPH0 428 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 SLC9A3R1O14745 358 aaPredicted RBP17.9■□□□□ 0.46
HMG20B-212ENST00000487894 CYP17A1P05093 508 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 GNA15P30679 374 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 RGS7P49802 495 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 YWHAGP61981 247 aaKnown RBP eCLIP17.9■□□□□ 0.46
HMG20B-212ENST00000487894 CCINQ13939 588 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 NCAPHQ15003 741 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 MEA1Q16626 185 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 GAB4Q2WGN9 574 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 C10orf120Q5SQS8 335 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 NAIF1Q69YI7 327 aaPredicted RBP17.9■□□□□ 0.46
HMG20B-212ENST00000487894 PMF1Q6P1K2 205 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 C1orf210Q8IVY1 113 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 SIX6OS1Q8N1H7 587 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 SCML4Q8N228 414 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 ARHGAP18Q8N392 663 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 NDRG1Q92597 394 aaKnown RBP17.9■□□□□ 0.46
HMG20B-212ENST00000487894 VPS16Q9H269 839 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 RBM12Q9NTZ6 932 aaKnown RBP17.9■□□□□ 0.46
HMG20B-212ENST00000487894 FAM86C1Q9NVL1 165 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 SPATA6Q9NWH7 488 aaPredicted RBP17.9■□□□□ 0.46
HMG20B-212ENST00000487894 DNAJC12Q9UKB3 198 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 SH3BP1Q9Y3L3 701 aa17.9■□□□□ 0.46
HMG20B-212ENST00000487894 PIEZO1Q92508 2521 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 TRDMT1O14717 391 aaKnown RBP17.89■□□□□ 0.45
HMG20B-212ENST00000487894 GREM1O60565 184 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 LETM1O95202 739 aaPredicted RBP17.89■□□□□ 0.45
HMG20B-212ENST00000487894 PNMA6AP0CW24 399 aaPredicted RBP17.89■□□□□ 0.45
HMG20B-212ENST00000487894 RALAP11233 206 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 LCP1P13796 627 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 USP8P40818 1118 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 GPD2P43304 727 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 DAOAP59103 153 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 LRRC32Q14392 662 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 KLHL40Q2TBA0 621 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 ANO6Q4KMQ2 910 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 TMEM196Q5HYL7 178 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 SMYD5Q6GMV2 418 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 FSTL4Q6MZW2 842 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 TADA2BQ86TJ2 420 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 MAML2Q8IZL2 1156 aaPredicted RBP17.89■□□□□ 0.45
HMG20B-212ENST00000487894 AOPEPQ8N6M6 819 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 ZNF606Q8WXB4 792 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 SPOCK2Q92563 424 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 CDK5RAP1Q96SZ6 601 aaKnown RBP17.89■□□□□ 0.45
HMG20B-212ENST00000487894 LSM14BQ9BX40 385 aaKnown RBP17.89■□□□□ 0.45
HMG20B-212ENST00000487894 IRF2BPLQ9H1B7 796 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 HSD3B7Q9H2F3 369 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 CNGB3Q9NQW8 809 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 TBC1D14Q9P2M4 693 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 DNMT3LQ9UJW3 386 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 FHOD1Q9Y613 1164 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 USP34Q70CQ2 3546 aa17.89■□□□□ 0.45
HMG20B-212ENST00000487894 YJEFN3A6XGL0 299 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 E7ENQ6 273 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 PIK3R2O00459 728 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 THAP12O43422 761 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 MED7O43513 233 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 ZNF18P17022 549 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 AMPD2Q01433 879 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 MTAPQ13126 283 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 GAS6Q14393 721 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 DHCR24Q15392 516 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 DGKKQ5KSL6 1271 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 KLHDC7AQ5VTJ3 777 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 DENND1BQ6P3S1 775 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 Q6ZS52 159 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 BBS7Q8IWZ6 715 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 ADGRG2Q8IZP9 1017 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 ATOH1Q92858 354 aaPredicted RBP17.88■□□□□ 0.45
HMG20B-212ENST00000487894 OTUB2Q96DC9 234 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 HSFY1Q96LI6 401 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 PHOX2BQ99453 314 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 IER2Q9BTL4 223 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 LIMA1Q9UHB6 759 aaKnown RBP17.88■□□□□ 0.45
HMG20B-212ENST00000487894 RASAL2Q9UJF2 1139 aa17.88■□□□□ 0.45
HMG20B-212ENST00000487894 OPRD1P41143 372 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 RPL34P49207 117 aaKnown RBP17.87■□□□□ 0.45
HMG20B-212ENST00000487894 COPB1P53618 953 aaKnown RBP17.87■□□□□ 0.45
HMG20B-212ENST00000487894 GOLGA8FQ08AF8 430 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 GOLGA8DPQ0D2H9 430 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 EFEMP1Q12805 493 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 NR1H3Q13133 447 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 HTR3DQ70Z44 454 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 MIB1Q86YT6 1006 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 CLEC4CQ8WTT0 213 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 P2RY13Q9BPV8 354 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 BPIFA3Q9BQP9 254 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 FUCA2Q9BTY2 467 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 NAA15Q9BXJ9 866 aaKnown RBP17.87■□□□□ 0.45
HMG20B-212ENST00000487894 FBRSL1Q9HCM7 1045 aaKnown RBP17.87■□□□□ 0.45
HMG20B-212ENST00000487894 PRMT8Q9NR22 394 aaPredicted RBP17.87■□□□□ 0.45
HMG20B-212ENST00000487894 CYTH4Q9UIA0 394 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 EML5Q05BV3 1969 aa17.87■□□□□ 0.45
HMG20B-212ENST00000487894 FOXN3O00409 490 aaPredicted RBP17.86■□□□□ 0.45
HMG20B-212ENST00000487894 LAMTOR5O43504 91 aa17.86■□□□□ 0.45
HMG20B-212ENST00000487894 STC2O76061 302 aa17.86■□□□□ 0.45
HMG20B-212ENST00000487894 EGFP01133 1207 aa17.86■□□□□ 0.45
HMG20B-212ENST00000487894 UCHL3P15374 230 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms