RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ANKRD62A6NC57 917 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 RAB27BO00194 218 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 FYB1O15117 783 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 CCP110O43303 1012 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 CNOT3O75175 753 aaKnown RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 PIAS2O75928 621 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 ZKSCAN1P17029 563 aaPredicted RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 KLRC1P26715 233 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 GPC5P78333 572 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 ARHGEF7Q14155 803 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 KCNAB1Q14722 419 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 CC2D1BQ5T0F9 858 aaKnown RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 MEPCEQ7L2J0 689 aaKnown RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 C12orf76Q8N812 135 aaPredicted RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 NMD3Q96D46 503 aaKnown RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 PRR11Q96HE9 360 aaPredicted RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 SUCLG2Q96I99 432 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 AS3MTQ9HBK9 375 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 MLXIPLQ9NP71 852 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 MID2Q9UJV3 735 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 HDAC9Q9UKV0 1011 aa5.13□□□□□ -1.59
SMC4-219ENST00000487747 THRAP3Q9Y2W1 955 aaKnown RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.13□□□□□ -1.59
SMC4-219ENST00000487747 FAM90A10PA6NDY2 464 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 CA12O43570 354 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 PRAMEF2O60811 474 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 SCP2P22307 547 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 FMO1Q01740 532 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 ANKRD13BQ86YJ7 626 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 ADGRE3Q9BY15 652 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 CHST8Q9H2A9 424 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 USP29Q9HBJ7 922 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 POT1Q9NUX5 634 aa5.12□□□□□ -1.59
SMC4-219ENST00000487747 hCG_2014768A0A024R1R8 64 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 H3BNX3 289 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 THBS3P49746 956 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 HTR6P50406 440 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 ANAPC15P60006 121 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 SLC29A2Q14542 456 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 CNGA2Q16280 664 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 DENND2CQ68D51 928 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 VSTM1Q6UX27 236 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 C9orf47Q6ZRZ4 202 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 SESTD1Q86VW0 696 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 MARK4Q96L34 752 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 TM2D2Q9BX73 214 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 TRIM36Q9NQ86 728 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 ZBTB40Q9NUA8 1239 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 DKK4Q9UBT3 224 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 NKX1-2Q9UD57 310 aaPredicted RBP5.11□□□□□ -1.59
SMC4-219ENST00000487747 AFF4Q9UHB7 1163 aaKnown RBP5.11□□□□□ -1.59
SMC4-219ENST00000487747 TPCN1Q9ULQ1 816 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 SQORQ9Y6N5 450 aa5.11□□□□□ -1.59
SMC4-219ENST00000487747 C16orf96A6NNT2 1141 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 A8MVJ9 347 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 RRHO14718 337 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 TOMM40O96008 361 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 CRYABP02511 175 aaKnown RBP5.1□□□□□ -1.59
SMC4-219ENST00000487747 TNFRSF1BP20333 461 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 ACVR2AP27037 513 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 ME1P48163 572 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 CPT1AP50416 773 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
SMC4-219ENST00000487747 RPS13P62277 151 aaKnown RBP5.1□□□□□ -1.59
SMC4-219ENST00000487747 MTX1Q13505 466 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 FHL3Q13643 280 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 KPNB1Q14974 876 aaKnown RBP5.1□□□□□ -1.59
SMC4-219ENST00000487747 MIDNQ504T8 468 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 GRHL2Q6ISB3 625 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 ANO7Q6IWH7 933 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 CLEC9AQ6UXN8 241 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 PNPLA1Q8N8W4 532 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 ZFYVE19Q96K21 471 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 SCNM1Q9BWG6 230 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 BRIP1Q9BX63 1249 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 DHX36Q9H2U1 1008 aaKnown RBP5.1□□□□□ -1.59
SMC4-219ENST00000487747 DDX20Q9UHI6 824 aaKnown RBP5.1□□□□□ -1.59
SMC4-219ENST00000487747 FZD4Q9ULV1 537 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 SLC27A6Q9Y2P4 619 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 HS3ST3B1Q9Y662 390 aa5.1□□□□□ -1.59
SMC4-219ENST00000487747 CNTNAP2Q9UHC6 1331 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 ISM1B1AKI9 464 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 FAM227AF5H4B4 570 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 MBPP02686 304 aaPredicted RBP5.09□□□□□ -1.59
SMC4-219ENST00000487747 CBSLP0DN79 551 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 TXNP10599 105 aaKnown RBP5.09□□□□□ -1.59
SMC4-219ENST00000487747 BTF3P20290 206 aaKnown RBP5.09□□□□□ -1.59
SMC4-219ENST00000487747 CBSP35520 551 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 EPHB1P54762 984 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 STIM1Q13586 685 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 SLC9C1Q4G0N8 1177 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 PLAG1Q6DJT9 500 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 COLCA1Q6ZS62 124 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 UNC13DQ70J99 1090 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 TFAP2DQ7Z6R9 452 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 C16orf71Q8IYS4 520 aaPredicted RBP5.09□□□□□ -1.59
SMC4-219ENST00000487747 PELI3Q8N2H9 469 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 ARFGAP1Q8N6T3 406 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 ACRBPQ8NEB7 543 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 HIST1H2AAQ96QV6 131 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms