RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TDRD5Q8NAT2 981 aaKnown RBP13.96□□□□□ -0.17
COL4A6-207ENST00000487645 CLEC4CQ8WTT0 213 aa13.96□□□□□ -0.17
COL4A6-207ENST00000487645 NDRG1Q92597 394 aaKnown RBP13.96□□□□□ -0.17
COL4A6-207ENST00000487645 NXPE3Q969Y0 559 aa13.96□□□□□ -0.17
COL4A6-207ENST00000487645 ZSWIM3Q96MP5 696 aa13.96□□□□□ -0.17
COL4A6-207ENST00000487645 DEF6Q9H4E7 631 aa13.96□□□□□ -0.17
COL4A6-207ENST00000487645 SLITRK6Q9H5Y7 841 aa13.96□□□□□ -0.17
COL4A6-207ENST00000487645 NHEJ1Q9H9Q4 299 aaPredicted RBP13.96□□□□□ -0.17
COL4A6-207ENST00000487645 TRPV4Q9HBA0 871 aa13.96□□□□□ -0.17
COL4A6-207ENST00000487645 OLA1Q9NTK5 396 aaKnown RBP13.96□□□□□ -0.17
COL4A6-207ENST00000487645 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL4A6-207ENST00000487645 OSER1Q9NX31 292 aa13.96□□□□□ -0.17
COL4A6-207ENST00000487645 TJP2Q9UDY2 1190 aa13.96□□□□□ -0.17
COL4A6-207ENST00000487645 UNC80Q8N2C7 3258 aa13.96□□□□□ -0.18
COL4A6-207ENST00000487645 C2orf78A6NCI8 922 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 LOC730098B7Z3J9 87 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 AKR1B10O60218 316 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 TLR5O60602 858 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 OLFM2O95897 454 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 RARGP13631 454 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 ATP5C1P36542 298 aaKnown RBP13.95□□□□□ -0.18
COL4A6-207ENST00000487645 AVPR1AP37288 418 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 SLC7A9P82251 487 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 ALKBH5Q6P6C2 394 aaKnown RBP13.95□□□□□ -0.18
COL4A6-207ENST00000487645 POTEHQ6S545 545 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 OLFML1Q6UWY5 402 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 MMS22LQ6ZRQ5 1243 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 FAM183BPQ6ZVS7 135 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 MON1BQ7L1V2 547 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 ARCQ7LC44 396 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 ARID3BQ8IVW6 561 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-207ENST00000487645 CCDC170Q8IYT3 715 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 MCOLN2Q8IZK6 566 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 ZSCAN18Q8TBC5 510 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-207ENST00000487645 SMARCD2Q92925 531 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 E2F7Q96AV8 911 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 TRIM11Q96F44 468 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 RPGRIP1Q96KN7 1286 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 ASB16Q96NS5 453 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 CYP2S1Q96SQ9 504 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 RNF38Q9H0F5 515 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 POPDC2Q9HBU9 364 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 TRPC7Q9HCX4 862 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 TAS2R14Q9NYV8 317 aa13.95□□□□□ -0.18
COL4A6-207ENST00000487645 TMCO5BA8MYB1 307 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 C2CD4DB7Z1M9 353 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 ANHXE9PGG2 379 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 COCHO43405 550 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 HSF2BPO75031 334 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 FAM78AQ5JUQ0 283 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 CCDC122Q5T0U0 273 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 MTSS1LQ765P7 747 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL4A6-207ENST00000487645 ARL14EPQ8N8R7 260 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-207ENST00000487645 RNF139Q8WU17 664 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL4A6-207ENST00000487645 FAM149B1Q96BN6 582 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 C11orf70Q9BRQ4 267 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 CCSER2Q9H7U1 834 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 ZFP14Q9HCL3 533 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 TDP1Q9NUW8 608 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 OBP2AQ9NY56 170 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 DNMT3LQ9UJW3 386 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 NENFQ9UMX5 172 aa13.94□□□□□ -0.18
COL4A6-207ENST00000487645 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 SIGLEC16A6NMB1 481 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 FYNP06241 537 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 CKMP06732 381 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 MYBL1P10243 752 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 NCAM1P13591 858 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 TCF3P15923 654 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 ZP2Q05996 745 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-207ENST00000487645 TAF5Q15542 800 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 C2CD6Q53TS8 623 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 C10orf120Q5SQS8 335 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 C10orf76Q5T2E6 689 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 FAM102AQ5T9C2 384 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-207ENST00000487645 MSANTD2Q6P1R3 559 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 HFE2Q6ZVN8 426 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
COL4A6-207ENST00000487645 CELF5Q8N6W0 485 aaKnown RBP13.93□□□□□ -0.18
COL4A6-207ENST00000487645 KIAA1958Q8N8K9 716 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 C3orf20Q8ND61 904 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 ELSPBP1Q96BH3 223 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 SLC2A13Q96QE2 648 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 BAG1Q99933 345 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-207ENST00000487645 NACA2Q9H009 215 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 KIF9Q9HAQ2 790 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 TMEM51Q9NW97 253 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 RRN3Q9NYV6 651 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 IGSF9Q9P2J2 1179 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 TMEM59LQ9UK28 342 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 ARHGAP26Q9UNA1 814 aa13.93□□□□□ -0.18
COL4A6-207ENST00000487645 TCRBV5S1A1TA0A578 114 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 CAPN9O14815 690 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 ECI2O75521 394 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms