RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 KANSL1LA0AUZ9 987 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 FAM92AA1XBS5 289 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 FAM170BA6NMN3 283 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 CHADO15335 359 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 COCHO43405 550 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 RTN3O95197 1032 aaPredicted RBP7.56□□□□□ -1.2
UBE4B-209ENST00000487244 GNA14O95837 355 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 OLFM2O95897 454 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 USP17L7P0C7H9 530 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 CCDC192P0DO97 292 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 HDCP19113 662 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 PRKCQQ04759 706 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 DHX9Q08211 1270 aaKnown RBP7.56□□□□□ -1.2
UBE4B-209ENST00000487244 FZD5Q13467 585 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 MTF1Q14872 753 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 GOLGA7BQ2TAP0 167 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 MIIPQ5JXC2 388 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 TRIM65Q6PJ69 517 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 TMEM270Q6UE05 265 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 TTC30AQ86WT1 665 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 SH3RF2Q8TEC5 729 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 WBP2Q969T9 261 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 E2F7Q96AV8 911 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 ITPKCQ96DU7 683 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 FAXDC2Q96IV6 333 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 SLITRK1Q96PX8 696 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 EBF3Q9H4W6 596 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 THAP9Q9H5L6 903 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 ZFAND3Q9H8U3 227 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 NMUR1Q9HB89 426 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 GKN1Q9NS71 199 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 SAMSN1Q9NSI8 373 aaKnown RBP7.56□□□□□ -1.2
UBE4B-209ENST00000487244 FAM86C1Q9NVL1 165 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 OSER1Q9NX31 292 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 TMEM63CQ9P1W3 806 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 NDRG2Q9UN36 371 aaKnown RBP7.56□□□□□ -1.2
UBE4B-209ENST00000487244 ARHGAP26Q9UNA1 814 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 SIT1Q9Y3P8 196 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 CPQQ9Y646 472 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 WNT6Q9Y6F9 365 aa7.56□□□□□ -1.2
UBE4B-209ENST00000487244 SPECC1L-ADORA2AF8WAN1 911 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 H0Y858 1186 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 GOLGA6L22H0YM25 854 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 LEFTY2O00292 366 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 O00370 1275 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 MDM4O15151 490 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 P4HA2O15460 535 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 FGFR1OPO95684 399 aaKnown RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 TBX18O95935 607 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 FBXO45P0C2W1 286 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ZDHHC11BP0C7U3 371 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 CD19P15391 556 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 SLC9A1P19634 815 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 TBXAS1P24557 533 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 BRD2P25440 801 aaKnown RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ERCC5P28715 1186 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 MTIF2P46199 727 aaKnown RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 KPNA1P52294 538 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 KIF11P52732 1056 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ZNF132P52740 706 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 SLC7A9P82251 487 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 NHLH1Q02575 133 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ZNF268Q14587 947 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 TPD52L1Q16890 204 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ARHGAP29Q52LW3 1261 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ARHGAP17Q68EM7 881 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ZNF852Q6ZMS4 543 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 SCD5Q86SK9 330 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 PIGZQ86VD9 579 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 DTWD2Q8NBA8 298 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 RBBP8NLQ8NC74 664 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 CSGALNACT1Q8TDX6 532 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 FAM3CQ92520 227 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 NDRG1Q92597 394 aaKnown RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 SHDQ96IW2 340 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 DUSP16Q9BY84 665 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 LINC00597Q9H2U6 94 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 KIF9Q9HAQ2 790 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 SIX2Q9NPC8 291 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ACP6Q9NPH0 428 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 TRPV5Q9NQA5 729 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 RBM12Q9NTZ6 932 aaKnown RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 PGPEP1Q9NXJ5 209 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 ZMYM5Q9UJ78 669 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 NUDT5Q9UKK9 219 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 TSPAN16Q9UKR8 245 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 NFE2L3Q9Y4A8 694 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 PCDHB9Q9Y5E1 797 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 PCDHB4Q9Y5E5 795 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 RIF1Q5UIP0 2472 aaKnown RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 MYO18AQ92614 2054 aaKnown RBP7.55□□□□□ -1.2
UBE4B-209ENST00000487244 MYO15AQ9UKN7 3530 aa7.55□□□□□ -1.2
UBE4B-209ENST00000487244 A0A1W2PQH9 124 aa7.54□□□□□ -1.2
UBE4B-209ENST00000487244 SOBPA7XYQ1 873 aa7.54□□□□□ -1.2
UBE4B-209ENST00000487244 BECN2A8MW95 431 aa7.54□□□□□ -1.2
UBE4B-209ENST00000487244 KCNJ18B7U540 433 aa7.54□□□□□ -1.2
UBE4B-209ENST00000487244 MBD3O95983 291 aa7.54□□□□□ -1.2
UBE4B-209ENST00000487244 PNMA6AP0CW24 399 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-209ENST00000487244 MBL2P11226 248 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms