RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 EGFRP00533 1210 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 STX3Q13277 289 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 KRT81Q14533 505 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 ZNF699Q32M78 642 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 OR6B2Q6IFH4 312 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 PHTF2Q8N3S3 785 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 USP13Q92995 863 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-211ENST00000486901 MIS12Q9H081 205 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 PICK1Q9NRD5 415 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 TAGLN3Q9UI15 199 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 GINS2Q9Y248 185 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 MFHAS1Q9Y4C4 1052 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 RGS20O76081 388 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 RAG1P15918 1043 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 ZNF677Q86XU0 584 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 ARHGAP24Q8N264 748 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 IFT43Q96FT9 208 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 MPP4Q96JB8 637 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 JPH1Q9HDC5 661 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-211ENST00000486901 SEPT10Q9P0V9 454 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 USP18Q9UMW8 372 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-211ENST00000486901 NRAPQ86VF7 1730 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 A0A1B0GTW7 788 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 GOLGA8TH3BQL2 631 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 M0QYV0 167 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 B4GALT5O43286 388 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 CALB1P05937 261 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SERPINB5P36952 375 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 CCR10P46092 362 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 YWHAZP63104 245 aaKnown RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SLC25A11Q02978 314 aaKnown RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 CA9Q16790 459 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 HADHQ16836 314 aaKnown RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 LIN52Q52LA3 116 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 FASTKD1Q53R41 847 aaKnown RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SNRNP48Q6IEG0 339 aaKnown RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 MTHFD1LQ6UB35 978 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 FAM156AQ8NDB6 213 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 AZIN2Q96A70 460 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 CNBD2Q96M20 576 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 RPAP3Q9H6T3 665 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 DRG1Q9Y295 367 aaKnown RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 PKNOX1P55347 436 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 KRT76Q01546 638 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 MED21Q13503 144 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 PIGHQ14442 188 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 OR6Y1Q8NGX8 325 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 ATP6V0A1Q93050 837 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SPATA16Q9BXB7 569 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 XAB2Q9HCS7 855 aaKnown RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 PREBQ9HCU5 417 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 PLLPQ9Y342 182 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 FIS1Q9Y3D6 152 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 C10orf71Q711Q0 1435 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 DGAT1O75907 488 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 KRT37O76014 449 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 TM7SF2O76062 418 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 ZBED1O96006 694 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 AMHP03971 560 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SNRPAP09012 282 aaKnown RBP12.84□□□□□ -0.35
HSPG2-211ENST00000486901 JAK3P52333 1124 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 CMC1Q7Z7K0 106 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SAMD3Q8N6K7 520 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 SNX31Q8N9S9 440 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 ADPGKQ9BRR6 497 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 GRIP2Q9C0E4 1043 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 FAM49BQ9NUQ9 324 aa12.84□□□□□ -0.35
HSPG2-211ENST00000486901 A0A088AWK7 358 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 SPDYE16A6NNV3 312 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-211ENST00000486901 ADCY3O60266 1144 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 USP12O75317 370 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 TFE3P19532 575 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-211ENST00000486901 GARTP22102 1010 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 PTGER2P43116 358 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 INHBCP55103 352 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 FAM160B2Q86V87 743 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 HEXIM2Q96MH2 286 aaKnown RBP12.83□□□□□ -0.36
HSPG2-211ENST00000486901 ANKEF1Q9NU02 776 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 HBS1LQ9Y450 684 aaKnown RBP12.83□□□□□ -0.36
HSPG2-211ENST00000486901 PSAT1Q9Y617 370 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 INO80B-WBP1J3KQ70 363 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 ENTPD3O75355 529 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 RFPL1O75677 317 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 ACTR3P61158 418 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms