RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 RECQL4O94761 1208 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 ABLIM3O94929 683 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 SLITRK3O94933 977 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 LYPLA2O95372 231 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 XRCC6P12956 609 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 CPA1P15085 419 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 ATF2P15336 505 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 XBP1P17861 261 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 FCARP24071 287 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 PSMA5P28066 241 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 PDIA3P30101 505 aaKnown RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 KPNA1P52294 538 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 ROR1Q01973 937 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 PRPF4BQ13523 1007 aaKnown RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 ACAP1Q15027 740 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 FAM187BQ17R55 369 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 TPGS2Q68CL5 300 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 SLC8B1Q6J4K2 584 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 VITQ6UXI7 678 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 MFSD6LQ8IWD5 586 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 TCEAL8Q8IYN2 117 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 SYNPOQ8N3V7 929 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 C17orf50Q8WW18 174 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 JPH3Q8WXH2 748 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 HAS1Q92839 578 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 PMEPA1Q969W9 287 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 SH3KBP1Q96B97 665 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 RMDN2Q96LZ7 410 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 HHIPQ96QV1 700 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 AGXT2Q9BYV1 514 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 POLR3FQ9H1D9 316 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 C2orf40Q9H1Z8 148 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 FZD8Q9H461 694 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 TRPV4Q9HBA0 871 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 CYP4F11Q9HBI6 524 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 C6orf203Q9P0P8 240 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 ZFYVE26Q68DK2 2539 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 H3BRJ5 948 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 K7ESF4 209 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 EREGO14944 169 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 SYN3O14994 580 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 CHADO15335 359 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 PIP5K1CO60331 668 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 PHACTR2O75167 634 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 E2F6O75461 281 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 KCNK5O95279 499 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 SKILP12757 684 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 MYL4P12829 197 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 GLB1P16278 677 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 RPS6KB1P23443 525 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 TKTP29401 623 aaKnown RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 PRPHP41219 470 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 VIPR2P41587 438 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 CLCNKBP51801 687 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 TPD52P55327 224 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 ARPP19P56211 112 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 EVCP57679 992 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 EHHADHQ08426 723 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 TBX2Q13207 712 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 SRSF5Q13243 272 aaKnown RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 NAB2Q15742 525 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 FXNQ16595 210 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 MAPK6Q16659 721 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 MUM1Q2TAK8 710 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 GFOD2Q3B7J2 385 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 DCAF4L1Q3SXM0 396 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 BMP2KLQ5H9B9 411 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 STPG1Q5TH74 334 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 AGAP9Q5VTM2 703 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 ACAD11Q709F0 780 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 RSRC2Q7L4I2 434 aaKnown RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 CACNA2D4Q7Z3S7 1137 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 HAUS6Q7Z4H7 955 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 WDR5BQ86VZ2 330 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 RALGPS2Q86X27 583 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 DDX42Q86XP3 938 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 NOSTRINQ8IVI9 506 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 MCPH1Q8NEM0 835 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 GABPB2Q8TAK5 448 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 ZSCAN18Q8TBC5 510 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 SNX29Q8TEQ0 813 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 TCEAL4Q96EI5 215 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 GSDMAQ96QA5 445 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 HSD17B14Q9BPX1 270 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 EIF2AK1Q9BQI3 630 aaKnown RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 LSM14BQ9BX40 385 aaKnown RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 RBCK1Q9BYM8 510 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 ARRDC1-AS1Q9H2J1 176 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 PDZD7Q9H5P4 517 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 SLITRK6Q9H5Y7 841 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 NCOA5Q9HCD5 579 aaKnown RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 ASAH2Q9NR71 780 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 RALYQ9UKM9 306 aaKnown RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 GTF3C4Q9UKN8 822 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 PNMA8BQ9ULN7 279 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 PCDHA12Q9UN75 941 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 GDAQ9Y2T3 454 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 PCDHGA5Q9Y5G8 931 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 INSL5Q9Y5Q6 135 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms