RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 CCDC148Q8NFR7 591 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 SMG7Q92540 1137 aaKnown RBP4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 LRRC45Q96CN5 670 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 RBM18Q96H35 190 aaKnown RBP4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 ORAI2Q96SN7 254 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 C7orf25Q9BPX7 421 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 TREX2Q9BQ50 279 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 KATNAL1Q9BW62 490 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 CLSTN2Q9H4D0 955 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 RABEP2Q9H5N1 569 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 BRD9Q9H8M2 597 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 FOXJ2Q9P0K8 574 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 GIMAP2Q9UG22 337 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 SH3BGRL2Q9UJC5 107 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 FAM50BQ9Y247 325 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 CAB39Q9Y376 341 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 PCDHGB3Q9Y5G1 929 aa4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.56□□□□□ -1.68
R3HDM1-217ENST00000486532 PHLDB1Q86UU1 1377 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 A8MVJ9 347 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 NEMP1O14524 444 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 PMM2O15305 246 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 HOXC11O43248 304 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 KINO60870 393 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 ZBED4O75132 1171 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 PALMO75781 387 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 BAG4O95429 457 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 GUCA1CO95843 209 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 APOA4P06727 396 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 MYCLP12524 364 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 ATP5DP30049 168 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 CYP2C19P33261 490 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 FOLR3P41439 243 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 TM4SF4P48230 202 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 GTF2A1P52655 376 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 CREMQ03060 361 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 UBXN1Q04323 297 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 NOMO1Q15155 1222 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 ANKDD1AQ495B1 522 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 CAVIN4Q5BKX8 364 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 ZNF362Q5T0B9 420 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 C11orf88Q6PI97 169 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 NEK10Q6ZWH5 1172 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 ARMC9Q7Z3E5 817 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 GALNT13Q8IUC8 556 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 EPHX4Q8IUS5 362 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 UBR7Q8N806 425 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 ACMSDQ8TDX5 336 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 TSPEARQ8WU66 669 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 LMBR1Q8WVP7 490 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 NRBF2Q96F24 287 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 EPSTI1Q96J88 318 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 NACA2Q9H009 215 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 QRSL1Q9H0R6 528 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 STMN4Q9H169 189 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 MYLK2Q9H1R3 596 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 CCDC68Q9H2F9 335 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 PNNQ9H307 717 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 UNKLQ9H9P5 680 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 AGO4Q9HCK5 861 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 RRN3Q9NYV6 651 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 LAMP5Q9UJQ1 280 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 ZNF112Q9UJU3 913 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 AJAP1Q9UKB5 411 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 ANKRD6Q9Y2G4 727 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 LRCH1Q9Y2L9 728 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 SNX8Q9Y5X2 465 aa4.55□□□□□ -1.68
R3HDM1-217ENST00000486532 CCDC169A6NNP5 214 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 SPTLC2O15270 562 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 NCAM2O15394 837 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 ZBTB43O43298 467 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 GPR32O75388 356 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 RBMXL2O75526 392 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 SNX4O95219 450 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 MT-ND3P03897 115 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 ERBB2P04626 1255 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 HSPA1AP0DMV8 641 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 HSPA1BP0DMV9 641 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 ZKSCAN1P17029 563 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 TRIM21P19474 475 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 CD86P42081 329 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 MCAMP43121 646 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 TNNT3P45378 269 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 PHKA1P46020 1223 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 ALDH1A3P47895 512 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 RBM5P52756 815 aaKnown RBP eCLIP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 RCAN1P53805 252 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 MGAT2Q10469 447 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 KIF5AQ12840 1032 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 GRSF1Q12849 480 aaKnown RBP eCLIP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 INAQ16352 499 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 C15orf59Q2T9L4 293 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 ARHGAP29Q52LW3 1261 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 PACS1Q6VY07 963 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 KRT74Q7RTS7 529 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 CCDC186Q7Z3E2 898 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 SLC9B2Q86UD5 537 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 LURAP1LQ8IV03 231 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 UNC45BQ8IWX7 931 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 TBC1D21Q8IYX1 336 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms